Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370330
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Entry
139370330 CDS
T10872
Name
(RefSeq) intraflagellar transport protein 56 isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139370330
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139370330
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC3
TPR_19
TPR_16
TPR_2
TPR_1
TPR_8
TPR_6
TPR_9
Coatomer_E
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
139370330
NCBI-ProteinID:
XP_070965845
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Position
17:15787023..15795819
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AA seq
558 aa
AA seq
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MILSRVKPAVGGDSAASVSEKKKKNKAKKSPRLEEYLNQRDYLGAQTLLEFQRDVGEKEE
HADLWIGYCAFHLGDYKRAMEEYRALTLRLEEPGEVWVYMACTQFFLGLYREAEEAANKA
PKCALQNRLLFHLAHKFNDEKKLMGFHQNLEDVTEDQLSLASIHYMRSHYQEAIDIYKRI
LLQNRDFLALNVYVALCYYKLDYYDVSQEVLAVYLQSIPESTIALNLKACNHFRLYNGKA
AEAELKNLIDISSCSFEFAKELIRHNLVVFRGGEGALQVLPPLIDVISEARLNLVIYYLR
QDDVQEAYTLIKDLEPTTPQEYILKGVVNAALGQEIGSRDHLKIAQQFFQLVGGSASECD
TIPGRQCMASCFFLLRQFEDVLIYLNSVKSYFYTEDTFNFNYAQAKAALGNYKEAEEIFL
LIQGEKMKTDYVYLSWLTRCYIMNQKGRLAWELYLKMGASPDSFSLLQLIANDCYQMGQF
YWAAKAFDSLEKLDPDSNYWEGKRGACVGIFQLILAGRESKETLKEVLPLLRSTQNPQVE
YIIRALRKWAKDNRVPLT
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgattctgtctcgggtgaagccagcagtaggtggagattctgcagctagcgtcagtgag
aagaagaagaaaaacaaagccaagaagagccctcgcctggaggaatacctcaaccagaga
gactaccttggggcacaaactctgttagagtttcagcgagatgttggagaaaaagaggag
catgcagacctttggattggctactgtgcctttcacttgggtgattacaagagagcaatg
gaggagtacagggccttgacactccggttagaagaaccaggggaggtgtgggtgtatatg
gcctgcactcagtttttcctgggactctacagagaggcagaggaggctgcaaacaaggct
ccaaagtgtgcacttcagaatcgcctgctcttccacctggctcataagttcaacgatgag
aagaagctgatgggtttccaccagaacctggaggatgtgactgaggaccagctgagcctg
gcctccatccactacatgagatcacactatcaggaggccatcgacatctacaaacgcatc
ctgctacagaatagagatttcctggctcttaacgtgtacgtagcgctgtgctactacaag
ttggactactatgatgtttcccaagaggtgttggctgtgtatctgcagagcattcctgaa
tccaccatcgctctcaacctcaaggcctgcaaccacttcaggctgtacaatggcaaggca
gctgaggccgagttaaagaacctcatagatatctcctcctgctcctttgagtttgctaag
gagcttatccggcataacctggtggtgtttcgtggtggggagggggcgttgcaggtgctg
cccccgttgattgatgtcatctctgaggctcggttgaacctggtcatctactacctcaga
caagatgatgttcaagaggcttacaccctcataaaagacttggagccaaccacaccacag
gagtacattttgaaaggagtggtgaatgccgctttgggtcaagaaattggatcgagggat
cacctgaagattgctcaacagttcttccagctggtcggaggctcagccagcgaatgcgac
acgatacctggaagacagtgtatggcttcctgtttcttccttctgaggcagtttgaagac
gttctcatctacctcaactcagtcaagagttacttctataccgaggatacgttcaatttc
aactacgcccaggccaaagctgccttgggcaactacaaagaagcagaggagatatttctg
ctgatccagggtgagaagatgaagactgactatgtatacctgagctggctgactcgctgc
tacatcatgaaccagaaaggccggctagcctgggagctgtatctgaagatgggggcttcg
ccagactccttcagcctcctacaactcattgccaatgactgctatcagatgggtcagttc
tactgggcagccaaagcgttcgattctctggagaaactggatcccgactccaactactgg
gagggcaagagaggggcttgtgtcggaatcttccagctcatactggcaggcagagagtcg
aaggaaaccttgaaggaggtgctgcccctgttgaggagcacacagaacccccaggtggag
tacattatcagagctctgaggaaatgggccaaagacaacagggttcctctgacatag
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