Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370340
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Entry
139370340 CDS
T10872
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139370340
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Axon guidance molecules
139370340
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
139370340
NCBI-ProteinID:
XP_070965866
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Position
17:16040852..16149216
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AA seq
603 aa
AA seq
DB search
MLRILDPVVTVVTISFVVEGVLGGYGMSMFAAQTSPPDPCYDENGNPRRCIPDFVNSAFG
KEVRTSSTCGKTPGRYCLVTEKGDERNRNCHTCDASDPKKYHPPAYLTDLNNPHNLTCWQ
SENYIQYPQNVTITLSLGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKSWVPFQYYSTQC
RKMYTKPSKATITKQNEQEAICTDSHTDMHPLSGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVTFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVKDRDGN
LVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFSMELYKLSG
RKSGGVCLNCRHNTAGRHCHYCKEGYYRDLSKTISHRKACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVVPPTTTASSTEEPADCDSYCKASKG
KLKINMKKYCKKDYAVQVHILKADKAGEWWKFTVNIISVYKQGESRIRRGDQFLWVRAKD
VACKCPKIKTGKKYLLLGNNEDSPGQSGVVADKGSLVIQWRDTWARRLRKFQQREKKGKC
KKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggattttggatcccgtggtcactgtcgtgaccatttcctttgtggtcgagggg
gtgctcggtggctacgggatgagcatgttcgccgcgcaaacatctcccccggacccttgc
tacgacgagaatggtaacccgaggagatgcatccccgattttgtgaactccgctttcgga
aaggaagtccgcacttccagcacctgtggtaaaaccccgggtaggtactgtttggtaaca
gagaagggcgacgagagaaataggaactgccatacgtgcgatgcctcggaccccaaaaag
tatcacccaccggcatatctaacggatctcaacaacccccataatctcacatgttggcaa
tcggaaaattacatccaatacccccaaaacgtcaccataacactgtcactgggcaagaaa
ttcgaagtcacctacgtaagcctgcagttctgctcacctcgacccgaatctatggctatc
ttcaagtctatggactacggcaaatcttgggtacctttccaatactattcgacccaatgc
aggaaaatgtacaccaaaccaagcaaggccaccattaccaaacagaacgaacaagaggcg
atatgcacagactcccacacggacatgcaccctctatccggcggtctcattgccttcagc
actctggacggcagaccatcggcgcacgacttcgacaattcgccggtgctccaggactgg
gtcaccgccacggatatcaaggtgacgttcagccgattgcacactttcggtgatgagaac
gaggatgactcggagctagcccgggactcttatttctatgcggtgtccgatctgcaagtt
ggcggtcgatgcaaatgcaatggccacgcttcgcggtgcgtaaaagacagggatggaaac
cttgtttgtgagtgcaaacataataccgcgggaccggagtgcgacaggtgcaagcctttc
cattatgatcggccgtggcaacgcgcaacagctagagaagccaacgaatgtgtcgcctgt
aactgtaacctgcacgccaggcgatgccgtttcagcatggagctgtacaagctgtctggg
aggaagagcggaggagtctgtctcaactgtcgccacaacacggccggacgccactgtcac
tactgcaaggagggttactatagagacctgtccaaaaccatctctcacaggaaagcctgc
aaagcatgtgattgccatcccgtgggtgctgctggcaaaacctgtaaccaaaccacgggt
caatgtccctgtaaagacggcgtgactggtatcacgtgcaaccgctgcgctaaaggctac
cagcagagccgctcgcccattgccccctgcataaagattcccgttgttcccccgacaacc
acagccagcagtacagaggagccagcagactgtgactcctattgcaaggcgtcgaaaggc
aaactgaagatcaacatgaagaaatactgcaagaaagattacgctgtccaggtgcacatt
ctgaaggcggacaaggcgggcgagtggtggaagttcaccgtcaacatcatctctgtctac
aagcagggcgagagccgcatccgccgcggcgaccagttcctgtgggtcagggccaaggat
gtggcgtgcaagtgtccaaagatcaagaccgggaagaagtacctgctcctgggtaacaat
gaggattctccagggcagtctggagtggtggccgataagggctccctggtcatccagtgg
agagacacatgggcccgtcggctgaggaagttccagcaacgtgagaagaaaggcaagtgc
aagaaggcatag
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