Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370355
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Entry
139370355 CDS
T10872
Name
(RefSeq) neuronal-specific septin-3-like isoform X1
KO
K16938
septin 3/9/12
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139370355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139370355
04812 Cytoskeleton proteins [BR:
ocla04812
]
139370355
04147 Exosome [BR:
ocla04147
]
139370355
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Sperm associated proteins
139370355
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
139370355
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139370355
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Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
RsgA_GTPase
GTP_EFTU
AIG1
Roc
AAA_16
Ras
AAA_22
ABC_tran
Dynamin_N
NB-ARC
AAA_29
SRPRB
P-loop_TraG
URGCP_GTPase
FtsK_SpoIIIE
Ploopntkinase3
Sigma54_activat
G-alpha
AAA_7
RNA_helicase
FeoB_N
AAA_24
Motif
Other DBs
NCBI-GeneID:
139370355
NCBI-ProteinID:
XP_070965880
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Position
17:16589309..16677448
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AA seq
591 aa
AA seq
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MSDSKVTAHLDGIISDFEALKRSFEVEDVDTSVNSSPGSRRVPNNTNHRPVMSPTSIYYR
ELGASNNNNGSISKTIMGGGSSKPPESISRGRTELSIDISSKQVDPTSPGSLRLGAKRPE
VLGHSKTPEVGHKREVAFSKTPQEVVIRTGARTPEPPSHARRFEPLSLGDGPAVRTTPGI
SVTKAPETTGNGKNNHENHGHHAPVHHPHHPNPHHNTIVTTIRCSSPNRTKSPNPDRSEV
NPSHSNMSAPPHPQPPAKGASHAAGDFSYVGIDAILEQMRRKAMKQGFELNIMIVGQSGL
GKSTLMNTLFKSKVSRKSVVSTPEERIPKTIEIKSISHDIEEKGVRMKLTVIDTPGFGDH
INNENCWQPIMKFINDQYEQYLQEEINIDRKKRIPDSRVHCCMYFIPPTGHCLRPLDVEF
MSRLSKVVNIVPVIAKADTLTLEERDFFKQTIREELRANGIDVYPQKEFDEDADDRMIND
KIREMIPFAVVGSNQEYQVNGKRLLGRKTKWGTIEVENIAHCEFAYLRDLLIRTHMQNIK
DITSSIHYEVYRVRRLNETNAQPNAQPPNTLVNPQQANGVAAQHQVLTHEM
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactccaaggttactgctcacttggacggaattatctcggactttgaagctcta
aagaggtcatttgaggtggaggatgtggacacctcggtcaactcctcgccaggctcccgc
cgggtgcccaacaacaccaaccaccgccccgtcatgtcccccaccagcatctactaccgt
gaactgggcgccagcaataacaacaacggctccatctccaagaccatcatgggaggggga
agctccaagcctcctgaatccatatcccggggacgcacggagctctccatcgacatttcc
tccaagcaggtagatccaaccagccctggttccctccgattgggagcgaaacgacccgag
gtcctaggccactccaagacgcccgaggtgggccacaaacgggaggtggccttctctaaa
acgccccaggaggtggtgattcgcacaggggcccggacccccgagccacccagccatgcc
cggaggttcgagcccctcagtctgggggatggcccggccgtgaggaccacaccagggatc
agcgtcaccaaagcacccgagacaacggggaatggaaagaacaaccacgagaaccatggt
catcatgcaccggtccaccacccgcaccatcccaacccccaccacaacaccatcgtcacc
accatccgctgctcctcgcccaaccgcaccaagtccccaaaccctgacaggtcagaggtc
aatccgagccacagcaacatgtccgccccaccacatccgcaaccccctgccaagggagcg
tcacatgccgctggcgacttcagctacgtgggcatcgatgccatcctggagcagatgagg
aggaaggccatgaaacagggctttgagctcaacatcatgatcgtcggtcagagtggtctg
gggaagtcgaccctgatgaacaccctgttcaagtctaaggtcagcaggaagtcggtggtg
tccacccccgaggagaggattcccaagaccatcgagatcaagtccatcagtcacgacatc
gaagagaagggcgtgaggatgaaactaacggtaatcgacactcccggctttggggaccac
atcaacaacgagaactgctggcagccaatcatgaagttcatcaacgaccagtatgagcag
tacctgcaggaggagatcaacatcgacaggaagaagagaatcccagactcacgggttcac
tgctgcatgtacttcataccacctactggacactgtctgaggcccctggatgtggagttt
atgagtcgtctgagtaaagtggtcaacatagtccctgtcatcgccaaggcagacacactc
accctggaggagagggacttcttcaaacagacgatcagggaagagctgcgagccaacggg
atcgacgtctaccctcagaaagagtttgacgaggatgctgatgacaggatgatcaatgat
aagatcagggaaatgatcccatttgctgtggtggggagcaaccaggagtaccaggtcaat
ggaaagaggcttctgggcagaaaaactaagtggggaaccatagaagttgagaacattgca
cactgtgagtttgcctacctgcgagaccttctcatcaggacccacatgcagaacatcaag
gacatcaccagtagcatccactacgaggtgtaccgtgtccgcaggctaaacgagaccaac
gcccagcccaacgcccagccacccaacacactggtcaacccacagcaggccaacggggtg
gcagcacagcaccaagtcctgacccatgagatgtag
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