Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370408
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Entry
139370408 CDS
T10872
Name
(RefSeq) junction plakoglobin-like
KO
K10056
junction plakoglobin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04382
Cornified envelope formation
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139370408
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139370408
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139370408
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139370408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
HEAT
ARMC9_ARM
ELMO_ARM
Adaptin_N
WAPL
Atx10homo_assoc
BORCS7
Motif
Other DBs
NCBI-GeneID:
139370408
NCBI-ProteinID:
XP_070965963
LinkDB
All DBs
Position
17:complement(17861323..17882905)
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AA seq
734 aa
AA seq
DB search
MEMQMGNEGRVKVKEWQQTYYAGDSGIQSGATTVRTDDDGTEYSTKQYSTVTTTVVSENP
AEVESQYALTRAQRVRAAMFPETVMEGTTILSTQTDPSQMTNVQRLAEPSQLLKTAIVHL
INYQDDAELATRAIPELTKLLNDEDQVVVNKASLIVNQLTRKEASRRALMASPQMVAAVV
RAMQNTGDMETARATASILHNLSHQREGLLSIFKCGGIPALVRMLSSPMESVLFYAITTL
HNLLLHQEGAKMAVRLADGLQRMVPLLKKSNPKFLAITTDCLQLLSYGNQESKLIILANS
GPEGLVHIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVDAGGMQALGMHLTGSSQRLMQ
NCLWTLRNLSDAATKQEGLDSLLQTLVGLLSSDDVNMLTCSTGILSNLTCNNARNKAMVT
QSNGIEALIHAVLRAGEKEDVAEPAVCALRHLTSRHSDAEVAQNAVRMHYGIPAIVKLLN
QPYYWPVIKAVVGLIRNLALCPDNQTPLRDAGAIPRLVNLLLKAHQDAQKHGSAAQQTYQ
DGVRMEEIVEGCTGALHIMARDPINRGEIASMQTIPLFVQLLYSPVENVKRVSAGALCEL
ALDKQSAEMIDAEGASAPLMELLHSNNEGIATYAAAVLFRISEDKNSDYKKRVSVELTHS
LFKHDPAAWEMAHNAVPMESGYAADELDAGYHQYGDYPGDIPMDGEMGMSDVEYQSGGGG
MTYDMRQPGYAERY
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgcagatgggcaatgaggggagggtgaaggtgaaagagtggcagcagacatac
tacgccggggactctgggattcagtcaggagccaccacagtgaggaccgatgacgacggg
accgagtacagcaccaagcagtacagcaccgtcaccaccactgtcgtctcagagaaccct
gctgaagtggagtctcagtatgccctgacccgagcccagcgtgtccgagcggccatgttc
ccagagacggtgatggagggcacgaccatcctgtccacccagactgacccgtcccagatg
accaacgtccagcggctggccgagccctcgcagctcctcaagacggccatcgtccacctc
atcaactaccaggacgacgccgagctggccactcgcgccatccccgagctcaccaagctg
ctcaacgatgaggaccaggtggtggtcaacaaagcctccctgatcgtcaaccagctgacc
cgtaaggaggcgtctcgccgggcgctgatggcgtccccccagatggtggcggcggtggtg
cgggccatgcagaacaccggggacatggagacagcccgggctacagccagcatcctccac
aacctgtcccaccagagagagggcctgctctccatcttcaagtgtgggggcatccctgcc
ctggtccgcatgctcagttctcccatggagtctgtgctgttctatgccatcaccaccctc
cacaacctgctactgcaccaggagggagccaagatggcggtgcgcctggccgacggcctg
cagcgaatggtgcctctgctgaagaagagcaaccccaagttcctggccatcaccaccgac
tgcctgcagctgctgtcctacggcaaccaggagagcaagctgatcatcctggctaacagt
ggtccggagggcctggtccacatcatgaggaactacagctatgagaagctcctgtggacc
accagccgcgtgctcaaagtgctctctgtctgccccagcaacaaacctgccatcgtggat
gctggtgggatgcaggctctggggatgcacctgacgggttccagtcagcgtctgatgcag
aactgtctgtggaccctgaggaacctgtcggacgctgccactaaacaggagggtctggac
agtcttcttcagactctcgttggtctcctgagctctgacgacgtcaacatgctcacctgc
tccactggcatcctctccaacctcacctgcaacaacgctcgcaacaaggccatggtcacc
cagagcaacggcatcgaggcactcatccacgccgtcctgagggcgggagagaaggaggat
gtggcggagccggccgtgtgcgccctgcgtcacctgacgtcgcgccactccgacgccgag
gtggcccagaatgccgtgcgcatgcattatggcattcctgcgatcgtcaagctgctcaac
cagccctactactggcctgtcatcaaggctgtggttggtctgatccgtaacctggcactg
tgcccagacaaccagacccctctgagggatgcgggggccatcccccgcctggtcaatctg
ctgctcaaagcccaccaggacgcccagaaacacggctccgccgcacagcagacataccag
gatggcgtgaggatggaagagatcgtggaggggtgcacaggggccctgcacatcatggcc
agagaccccatcaacaggggagagatcgccagcatgcagaccatcccactctttgtacag
ctgctgtactctccagtggagaatgtgaagcgcgtgtcagcgggggctctgtgtgagctg
gccctggacaaacagtctgctgagatgatcgacgcagagggagcctccgcgccgctcatg
gagctgctgcactccaacaacgagggcatcgccacctacgctgccgccgttctcttccgc
atctccgaggacaagaactccgactacaagaagcgtgtgtccgtggagctcacgcactcc
ctgttcaagcacgaccccgccgcctgggaaatggcccacaatgctgtccccatggagtcc
ggctatgcagcagacgagctggacgcaggctaccaccaatacggagactaccctggtgac
atacccatggatggagagatggggatgtccgatgttgaataccaaagtggcggcggcggc
atgacctacgacatgaggcaaccgggatatgctgagcgctattag
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