Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370417
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Entry
139370417 CDS
T10872
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139370417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139370417
04147 Exosome [BR:
ocla04147
]
139370417
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
139370417
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
139370417
Exosomal proteins of other body fluids (saliva and urine)
139370417
Exosomal proteins of colorectal cancer cells
139370417
Exosomal proteins of melanoma cells
139370417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
AIF-1
TPR_MLP1_2
CCDC39
CENP-F_leu_zip
Mitofilin
Nuf2_DHR10-like
RelA_AH_RIS
YabA
DUF2461
Motif
Other DBs
NCBI-GeneID:
139370417
NCBI-ProteinID:
XP_070965984
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All DBs
Position
17:18092497..18096184
Genome browser
AA seq
522 aa
AA seq
DB search
MSFSRSSMSYSSSGGGGGGGTMSMRSGGGGGMGMGSSRFSSMGGGGGGGGGRVTAMRAGS
VYGGAGGSGVRISSSSFGSGGGGGGGGGGGGYGFRMGGGGGGGGFSFGMGGGGGGGGGGG
GADLHVSVNEKATMQNLNDRLSTYLEKVRMLEAANAELELKIRQFLESKTSPSARDYSGF
YATIADLQDKIQAATCLNGSIYLSIDNSKLAADDFRNKYENELAMRQSVEADIAGLKRML
DEMTMARSDLEMQIEGLKEELIYLKKNHEEELLAMRTQMTGQINVEVDAAPQEDLSRVMA
EIREQYEAGSAKNQRDLEAWFQTKTETLNKEVASSTEVLQTSKSEISEIRRTLQGLEIEL
QSQLSMKGSLENTLAETEGRYSMQLGRLQNQVTSLEEQLVSLRSDMERQGQEYKMLLDIK
TRLEMEIAEYRRLLDGEASGLGLSSSKSGHSSSSSHISSSSSGVSSGLSSGLSSSSSGLS
SGLSSSSSGPSSSTSTTRKVVIVTEEMVDGKVVSSSETKHTT
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagatctagcatgtcctacagcagcagcggcggtggaggcggaggtggc
accatgtccatgaggtctggtggtggaggtggaatgggtatgggctcctcccgcttctcc
tcgatgggtggtggtggtggaggaggaggaggccgagtcactgccatgagggccggcagc
gtgtatggaggagcaggaggctctggggtgcgcatctctagctcctcgttcggttccggt
ggtggaggtggtggaggtggtggtggtggcggttatggtttcagaatgggagggggcggc
ggcggtggcggttttagttttggcatgggtgggggtggtgggggtggtggtggcggcggt
ggagccgacctccatgtgtcggtcaatgagaaggccacaatgcagaacctgaacgaccgc
ctgtccacctacttggagaaggtgcgcatgctagaggcggccaacgccgagctggagctg
aagatccgtcagttccttgagagcaagacgtcccccagcgctcgcgactactctggcttc
tacgctactatcgccgaccttcaggacaagatccaggctgccacctgcttgaacggaagc
atctatctcagcatcgacaactcaaagctcgctgcagacgacttcagaaacaagtatgag
aacgagctggccatgcgtcagtcagtggaggcggacatcgccgggctgaagaggatgctg
gacgagatgaccatggccagatctgacctggagatgcagattgagggactgaaggaggag
ctcatctatctcaagaagaaccatgaggaggagctgctggccatgaggactcagatgact
ggacagatcaacgtggaggtggacgcagcaccacaggaggacctgtccagagtcatggct
gagattcgtgagcagtacgaggccggtagtgccaagaaccagcgcgacctggaggcttgg
ttccagaccaagacagagacgttgaacaaggaggtggcgtccagcacagaggttctccag
acctccaagtcagagatttcggagatccgtcgcacactgcagggcctggagattgaactg
cagtcacagctcagcatgaaaggctccctggagaacacgctggcggagactgaaggccgt
tactccatgcagctgggacgcctccagaaccaagtgaccagtctggaggagcagctagtg
tctcttcgcagcgacatggaacgccagggccaggagtacaagatgctgctggatatcaag
acacgcctggagatggagatcgctgagtacaggaggctgctggacggagaggctagcggc
cttggcctcagctcctcgaaatctggccacagctcctccagctcccacatcagctcgtct
agctccggcgtcagctccggcctaagctctggcctcagctcctccagctctggcctcagc
tccggcctcagctcctccagctccggccccagctcatccacctccaccacacgcaaggtg
gtgatcgtcacagaggaaatggtggatggcaaggttgtctcctcaagtgaaaccaaacac
accacttaa
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