Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370419
Help
Entry
139370419 CDS
T10872
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139370419
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139370419
04147 Exosome [BR:
ocla04147
]
139370419
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
139370419
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
139370419
Exosomal proteins of other body fluids (saliva and urine)
139370419
Exosomal proteins of colorectal cancer cells
139370419
Exosomal proteins of melanoma cells
139370419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
AIF-1
TPR_MLP1_2
ADIP
CENP-F_leu_zip
Rod_N
Nuf2_DHR10-like
CCDC39
RelA_AH_RIS
YabA
Motif
Other DBs
NCBI-GeneID:
139370419
NCBI-ProteinID:
XP_070965986
LinkDB
All DBs
Position
17:18071926..18075682
Genome browser
AA seq
512 aa
AA seq
DB search
MSFSRSSMSYSSSGGGGGGGTMSMRSGGGGGMGMGSSRFSSMGGGGGGGGGRVTAMRAGS
VYGGAGGSGVRISSSSFGSGGGGGGGGGGGYGFRMGGGGGGGGGGGGGGFGFGMGGGGGG
GGGADINVSANEKATMQNLNDRLSTYLEKVRMLEAANAELELKIRQFMESKTSPSARDYS
GFYATIADLQDKIQDATCLNGSIYLNIDNAKLAADDFRTKYENELAMRQSVEADIAGLKR
MLDEMTMARSDLEMQIEGLKEELIYLKKNHEEELLAMRTQMTGQINVEVDAAPQEDLSRV
MAEIREQYEAGSAKNQRDLEAWFQTKTETLNKEVASSTEVLQTSKSEISEIRRTLQGLEI
ELQSQLSMKGSLENTLAETEGRYSMQLGRLQNQVTSLEEQLVSLRSDMERQGQEYKMLLD
IKTRLEMEIAEYRRLLDGEASGLVHSSSKSGLSSSGSHISSSSSGLNSSSSGLSSSSSGP
SSSTSTTRKVVIVTEEMVDGKVVSSSETKHTS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagatctagcatgtcctacagcagcagcggcggtggaggcggaggtggc
accatgtccatgaggtctggaggtggaggtggaatgggtatgggctcctcccgcttctcc
tcgatgggtggtggtggtggaggtggaggaggccgagtcactgccatgagggccggcagt
gtgtatggaggtgcaggaggctctggggtgcgcatctctagctcctcgttcggttccggc
ggtggaggtggtggtggtggcggtggcggttatggtttcagaatgggagggggtggtggc
ggcggcggcggcggcggcggcggcggctttggtttcggcatgggagggggtggtggtggt
ggcggtggagccgacattaatgtgtcggccaacgagaaggccacaatgcagaacctgaac
gaccgcctgtccacctacttggagaaggtgcgcatgctagaggcggccaacgccgagctg
gagctgaagatccgtcagttcatggagagcaagacatcccccagtgctcgcgactactct
ggcttctacgctactatcgccgacctgcaggacaagatccaggatgccacctgcttgaac
ggaagcatctatctgaacatcgacaacgcaaagctcgctgcagacgacttcagaacgaag
tatgagaacgagctggccatgcgtcagtcagtggaggcggacatcgccgggctgaagagg
atgctggacgagatgaccatggccagatctgacctggagatgcagatcgagggactgaag
gaggagctcatctatctcaagaagaaccatgaggaggagctgctggccatgaggacacag
atgactggacagatcaacgtggaggtggacgcagcaccacaggaggacctgtccagagtt
atggctgagattcgtgagcaatacgaggccggtagtgccaagaaccagcgtgacctggag
gcctggttccagaccaagacagagacgttgaacaaggaggtggcgtccagcacagaggtt
ctccagacctccaagtcagagatttcggagatccgtcgcacactgcagggcctggagatt
gaactgcagtcacagctcagcatgaaaggctccctggagaacacgctggcggagacggag
ggccgttactccatgcagctgggacgcctccagaaccaagtgaccagcctggaggagcag
ctagtgtctctccgcagcgacatggaacgccagggccaggagtacaagatgctgctggac
atcaagacacgcctggagatggagatcgctgagtacaggaggctgctggacggagaggct
agcggccttgttcacagctcctcgaaatctggcctcagctcctccggctcccacatcagc
tcgtctagctccggcctcaactcctccagctccggcctcagctcctccagctccggcccc
agctcatccacctccaccacacgcaaggtggtgattgtcacagaggaaatggtggatggc
aaggttgtctcctcaagtgaaaccaaacacacctcttaa
DBGET
integrated database retrieval system
