Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370420
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Entry
139370420 CDS
T10872
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139370420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139370420
04147 Exosome [BR:
ocla04147
]
139370420
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
139370420
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
139370420
Exosomal proteins of other body fluids (saliva and urine)
139370420
Exosomal proteins of colorectal cancer cells
139370420
Exosomal proteins of melanoma cells
139370420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
ADIP
TPR_MLP1_2
CENP-F_leu_zip
Nuf2_DHR10-like
CC2-LZ
Plectin_PPL
Fez1
DASH_Duo1
Bacillus_HBL
SlyX
Motif
Other DBs
NCBI-GeneID:
139370420
NCBI-ProteinID:
XP_070965987
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All DBs
Position
17:complement(18160046..18165149)
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AA seq
438 aa
AA seq
DB search
MSALSLRSYGGSRGSSSMSLGGGYQSRIASRAPSVYGGAGGQSVRVSYASGTRSGFDLSS
ALGGDNGSYGSNAVSVNEKATMQNLNDRLATYLEKVRSLETANTQLERQIREWYEKKTPV
IRDYSKYEATLADLRRKISAATLSNASILLQIDNAKLAAEDFKVKFENEMVMRQSVEADI
AGLRKVLDELTMSRSDLEMQIEGLKEELVYLRKNHEEEIAAMRAHMNVSSVNVEVDAAPQ
QDMALMMEEIRTQYEGIAEKNRREMETWYKGKFDELNKVVTSSTETLQTSRSEINELKRT
FQALQIELQSQLSLKSALEGQLNETESRYSMQLNQLQGMVNSLEQELGRMKTDIERQAGE
YRMLLDIKTRLEMEIAEYRRLLDGEDVGRAVITKKVEIVEVKKPEPVVTKRVRTVIEEMV
DGKVVSRTEDVEMEVPKK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctttatcacttcgaagttatggaggcagccgaggctcatcctccatgtctctc
ggaggagggtaccagagtcgcatcgcatcacgggcaccaagcgtctatggaggggcaggg
ggacagagtgtccgcgtatcttatgcttcgggaaccaggagcggtttcgatctgtccagt
gcgcttggaggtgacaatggcagctatggtagtaatgcagtgtcggtcaacgagaaggcc
accatgcagaacctcaacgaccgtttggccacctacctggagaaggtgcgctccttggag
acggcgaatactcagctcgagcgtcaaatccgcgagtggtacgagaagaagacaccggtc
attagagattacagtaaatacgaagctactcttgccgacctgcgcagaaagatcagtgct
gccactctgagcaatgccagtatcctcctgcagatagacaatgccaaactggcagcagag
gacttcaaagtcaagtttgagaatgaaatggttatgcgtcagtcagtggaggcagacatt
gctggactgaggaaggttctggacgagttgaccatgtcccggtcagacctggaaatgcag
attgaggggctgaaggaggagctggtctacctcaggaagaaccatgaggaggagattgct
gccatgcgggctcacatgaacgtcagctcagtgaacgtggaggtggatgcagcaccccag
caggacatggcgttgatgatggaggagatccgaactcagtatgagggcattgccgagaag
aatcgccgcgaaatggaaacctggtacaagggcaagtttgatgagctgaacaaggtggtg
accagcagcacagagaccctccagacgtcccgcagtgagatcaacgagctcaagaggacc
tttcaggccctgcagatcgagctgcagtcccagctcagcctgaaatcagccttggaggga
cagctgaatgagacagagtcccgctacagcatgcagctgaaccagctccagggcatggtc
aacagcctggagcaggagttgggtcgcatgaagacggacatcgagaggcaggccggcgaa
taccgcatgctcctggacatcaagaccaggctggagatggagatcgcagagtacaggagg
ctgctggatggagaggatgtcgggagagctgtcatcaccaagaaggttgagattgttgag
gtcaaaaaacctgagccagtggtgacaaagagagtgaggacggtgattgaggagatggtt
gatggaaaggtggtctcccgtacagaggatgtggagatggaggtcccgaaaaaatag
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