Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370433
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Entry
139370433 CDS
T10872
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139370433
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139370433
04147 Exosome [BR:
ocla04147
]
139370433
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
139370433
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
139370433
Exosomal proteins of other body fluids (saliva and urine)
139370433
Exosomal proteins of colorectal cancer cells
139370433
Exosomal proteins of melanoma cells
139370433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
PUMA_CC
TPR_MLP1_2
CENP-F_leu_zip
DUF885
Nuf2_DHR10-like
Tup_N
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
139370433
NCBI-ProteinID:
XP_070966009
LinkDB
All DBs
Position
17:18126957..18131025
Genome browser
AA seq
441 aa
AA seq
DB search
MSYYSYKSSSGGGGPMNFSGGSNIMSSRVGYVSSAPKAFSVYGGGSGGGTRISSSSVRSV
SSGYGGGAGFGGGYGSGGGGYGSGGGGYGSGGGGGFNLSSALDGGAIHLNEKATMQNLND
RLSTYLDKVRSLEEANSKLEIQIREYYEKKGPAAERDYSKYWAIINDLKDKINGATCNNA
NILLQIDNSKLAADDFQTKFEHELMMRQSVEADIANLRRLLDQTTLTKADLEMQIESLQD
ELAYLKKNHIEELAAMRAQLTGTVNVEVDAAPQQDMSRTMEEIRTQYEGIIDKHRRDQEA
WFNDKSANLSKEVATSTEIIQTTKTEINDLRRTMQGLEIELQSQLSMKAALENTLRETDG
RYSAMLSGYQNQIDMLEQELNRVRQSIETQGHDYKMLLDIKSRLEQEIATYRGLLEGEES
RTVGSGGSKTTVTTSTVRSSS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcttactactcatacaagagctccagcggcggcggtggccccatgaacttctctggg
ggctccaacatcatgtcaagccgggtcggctacgtgtccagcgcccccaaggccttcagc
gtgtacggaggtggttccggcggtggcacccggatctcctcttcctccgtccgctcagtc
tcctctgggtatggcggcggggccggcttcggtggcggctatggatccggtggtggaggc
tatggatccggtggtggaggctatggatccggcggtggtggcggcttcaacctgtccagc
gccctggacggcggcgccatccacctgaacgagaaggccaccatgcagaacctgaacgac
cgcctgtccacctacctggataaggtgcgctcgctggaggaggccaactccaagttggag
attcagatcagagagtattatgagaagaaagggcctgccgctgagagggactacagcaaa
tactgggccatcatcaacgacctgaaggacaagatcaacggtgccacatgcaacaacgcc
aacatcctgctgcagattgacaactctaaactggctgctgatgacttccagaccaagttc
gagcatgagctgatgatgcgccagtcggtggaggctgacatcgccaacctgcgtcgcctg
ctggaccagaccactctgaccaaggccgacctggagatgcagatcgagagtctgcaggat
gagctggcctacctcaagaagaaccacatagaggagctggcagccatgcgtgctcaactc
accggcacagtgaacgtggaggtggacgcagcgccccagcaggacatgtccaggacaatg
gaggagatccgcacccagtacgagggcatcatcgacaaacaccgtcgcgaccaggaggca
tggttcaatgacaagtcagccaacctgtccaaggaggtggccaccagcacagagatcatc
cagacgaccaaaacggagatcaacgacctgagacgcaccatgcagggcctggagatcgag
ctgcagtcacagctcagcatgaaagcagctcttgagaacacactgagagagacagacggc
cgctacagcgccatgctctcggggtaccagaaccagatcgacatgctggaacaggagcta
aacagggtgcgccagagcatcgagacgcagggccacgattacaagatgctgctggacatc
aagtcccgtctggagcaggagatcgccacctacaggggcctcctggaaggggaggagtcc
agaactgttggctcagggggatcgaaaaccacagttacaacctccacagtgcgctcttcc
agctag
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