Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370434
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Entry
139370434 CDS
T10872
Name
(RefSeq) integrin alpha-X-like
KO
K05718
integrin alpha L
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecule (CAM) interaction
ocla04517
IgSF CAM signaling
ocla04518
Integrin signaling
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139370434
04517 IgSF CAM signaling
139370434
04518 Integrin signaling
139370434
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139370434
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139370434
04515 Cell adhesion molecules [BR:
ocla04515
]
139370434
04090 CD molecules [BR:
ocla04090
]
139370434
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139370434
Cell adhesion molecules [BR:
ocla04515
]
Integrins
Integrin alpha subunits
139370434
CD molecules [BR:
ocla04090
]
Proteins
139370434
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
FG-GAP_3
FG-GAP_2
GDU_TM
Copine
Mid2
vWA_Rv0959
Motif
Other DBs
NCBI-GeneID:
139370434
NCBI-ProteinID:
XP_070966010
LinkDB
All DBs
Position
17:complement(18489163..18514550)
Genome browser
AA seq
1211 aa
AA seq
DB search
MLVNKVKEKMSRQGPLSLLTWMGAMAVSSMAFNIDEANPKIYKGEEKDFFGYKVLQFISG
KEKGVMVSAPYQKNGSGGICRCAQDRTDCTDCYTPQETDTIKYIGLSMAGQSTSPPTFTA
CSPGLAHECDGNSYLNSICYQFNSQLQITSNFTPAFQECTKKIVDLVFLFDGSGSMTTDE
FDKNKGFINNIMTTLKNSSIKFAAVQFSSKARTVFNFNDFKEGRALTNLWKEKHMSNLTN
THQAIDFLLKNIFENQAAGATADATKVLVIITDGDPSDTDKRFNSIKRSDDKNIIRFVIG
VKNVDLTKLKLLASEPKENNTFLIQDYNGLKGILDNLQKKIFNIEGSKTALAGNLTKEMS
QSGFSAVYVNKDTLVLGSVGSNNWRGSLFETEGLRSEEREIQDPTLDKDSYMGYSVAVGK
KNENLLYFTGAPRSEHMGRILLFNKVNNNWTVAQRLSGEQMGSYFGAELCSVDIDSDGNT
DFLLVGAPMFHQRQREGRIYVYTLTDKLELRMEMNVSVMAQGRFGSSISSLTDLNGDGLK
DVAVGAPLEDDHRGAVYIYLGEKLKGIRPEFSQRISAAMMRSKLQFFGQTIDGKMDLGED
GLTDIVVGTRGAVVVLRSRPVLSISAHLHFHPSEISTDNFDCLAKETISPVVTLTACFNM
AEATKSKAVVLSAGMNVSYMLDVDPVRQRSRAFYNDTNKGARSLISTVELRKERTCFNHS
VYMTQCVIDTLSPIIIQLTFFQSESQQEGCTAILNTDSPAKAVVEVPFEKNCKENETCLA
ELEVDFNFITSTLLVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGLSFSMMHLLKSTRR
TVFSCGGLEDEMDRTTCSVSLPVYRSKTTAVFTSKFHILNTYNWNDTMEMTVIGLSDNGN
STNSSLTRTIPVQFAVDLVAKALPQDSTTYMNFTLEDTSPKRLVNVYEVQNLGFNSVPVT
VTFTFPTKLKHRFEMKDYEISVLQNHTQCGKVINSTTEYCSPEKYCKSIECESFLLEKFL
TVTFVLSGNVSFKDLDQHAKSLSLPKKFTGDRETVIFISLVKLGYDKKRYAQTASDPGDN
STSFHQTQNDVQAEIIIHPQRELILGTGVGVGLFLLIIITMAMYMLGCFKRKRLVDNAQE
DENEGEQREQDDAVQPITEKKLEPESEPESGAVESNSLLDDSQTENNGFHTCEAVGEGPK
EEQDVSESEAG
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgaacaaagtgaaggagaagatgtccaggcagggacccctctccctgctcacc
tggatgggagccatggctgtctcttcaatggctttcaacattgatgaagcaaacccaaaa
atctacaagggggaggaaaaggatttctttggatacaaagtcctgcaattcatatctggc
aaggagaaaggggtaatggtcagtgccccatatcagaagaacggatctggtggaatctgt
agatgtgctcaagacagaacagactgtacagactgttacactcctcaagaaactgacaca
atcaagtacattggactgtctatggctggacaatctacttctcctccaacattcactgcc
tgcagccctggtctggcacacgagtgtgatgggaactcctatctgaacagtatctgttat
cagttcaacagccagctccagatcacctcgaacttcacacctgccttccaagaatgtact
aagaaaatagtggacctcgttttcctctttgacggatcaggaagcatgacaacggatgaa
tttgataagaacaaaggtttcataaacaatatcatgacaaccctaaaaaactcctcaatc
aagtttgcagcggttcagttctcatcaaaggccaggacagttttcaacttcaatgacttc
aaagaggggagagccttgactaatctttggaaagaaaagcacatgtctaatctaaccaac
acacatcaggcgatagactttcttttgaaaaacatttttgaaaaccaagccgccggcgcc
accgcagatgcaactaaagtactggtcataataacagatggagatcccagtgatactgat
aaaaggtttaactctatcaaaagaagtgatgacaaaaacatcatccgtttcgttattggg
gtcaagaatgtcgatttgacgaaactaaagttactagcatcagagccaaaagagaacaac
actttcctcatccaggactacaacggactaaaaggaatcctagacaacttacaaaaaaag
atcttcaacattgaaggttccaagactgctctggctggaaacttgacgaaagagatgtct
cagagtgggttcagtgctgtctacgttaataaggataccttggttctgggctcagtagga
tcaaacaactggcgtggatctctctttgagactgagggtctgagatcagaggaaagggaa
attcaggaccccacattggacaaagattcctatatgggatactctgtagctgttgggaag
aagaacgagaaccttctatattttaccggagcaccaagatctgaacacatgggacggatc
ctacttttcaacaaggttaacaacaactggactgtggcacaaagattgtctggagaacag
atgggctcctacttcggggcagagctgtgttctgtggacatagactcagacggcaacaca
gacttcctcctggtgggtgcaccaatgtttcaccaacgacagagagagggcaggatctac
gtctacacactgactgataagctggaactgaggatggagatgaatgtttcagtgatggct
cagggtagattcggctcctccatctcctctctcacagacctgaatggagatgggctgaag
gatgtagctgtgggcgctccacttgaggacgatcacaggggggccgtgtacatctacctg
ggtgaaaagctaaaggggatccgccctgaattcagccagcgcatctcagctgcgatgatg
agatctaagctccagttctttggccagacgattgatgggaagatggacctgggtgaggat
ggactgactgacatcgtagtaggaacgcgtggcgcagttgtcgtcttgaggtccagaccg
gtcctcagcatctctgctcatctccacttccatccctcggagatcagcactgataacttt
gactgtctggcaaaagagaccatttcccctgtggtgactctgacagcctgctttaacatg
gcagaggcaacaaagagtaaagctgtggtgctgagtgcagggatgaacgtctcctacatg
ctggatgtggatccagtgagacagaggagccgagccttttacaatgacacaaacaaaggg
gccagaagtcttatctctactgtggagctgagaaaggagcggacctgcttcaaccactca
gtctacatgacacaatgcgtgattgacacattatcgcccataatcatccaacttacattt
tttcaatctgaaagccaacaagagggttgtactgccattctgaatactgacagtcctgca
aaggccgtggttgaggtgccctttgaaaagaactgcaaagaaaatgaaacctgtttggca
gagcttgaggtggacttcaacttcatcacatcaactttattagtggtggaccagagttac
tttaatgtgactataagactgtccaatcacggggatgactcctataacaccagtctaacc
ctcctctaccctcctggcctctcattctccatgatgcatcttctgaagtccacaaggaga
acggtgttcagctgtggtggtctggaagatgaaatggacagaactacatgcagtgtcagc
ctccctgtctaccgtagtaaaactaccgctgtgttcaccagtaaattccatattttgaat
acatacaactggaacgacacaatggagatgaccgtcattggactgagcgacaatggaaac
tcaaccaatagttccctaacccggaccatccctgttcaatttgcagttgacctggtagca
aaagcccttccccaagactccaccacttacatgaactttactctggaggacacatcacct
aaaagactggtgaatgtatatgaggtgcagaacttgggatttaactctgtaccagtcaca
gtcaccttcactttcccaactaagcttaagcacagatttgaaatgaaggactacgaaata
tctgtcttacagaaccacactcaatgtggaaaggttatcaattcaacaacagagtactgc
tctccagaaaaatactgcaagtccatcgagtgtgaaagtttccttttggagaagtttttg
acagttacatttgtgctgtctggaaatgtttccttcaaggacctcgatcaacatgcaaag
agcttgtcattgccaaagaaattcactggggacagagaaacagtcatcttcatcagttta
gtcaaactcggctatgacaaaaaacgatatgcccagacagcgagtgacccaggggataac
tctacaagcttccaccaaacacagaatgatgtccaggctgagatcatcattcatccacaa
agagagctgatactagggacaggagttggagtaggactctttctcctgatcatcatcaca
atggccatgtatatgctgggatgtttcaagagaaaaaggcttgttgataatgcacaggaa
gatgagaatgaaggggaacagagggagcaagatgacgctgttcagcctataacagagaaa
aagctagagcctgagagtgagcctgagagtggagcagtggagtcaaattctctccttgac
gacagtcaaacagaaaacaatggcttccacacttgtgaggcggtaggggagggaccaaaa
gaagaacaggatgtgtcagagtcagaagcaggctga
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integrated database retrieval system
