Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370435
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Entry
139370435 CDS
T10872
Name
(RefSeq) integrin alpha-X-like
KO
K05718
integrin alpha L
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecule (CAM) interaction
ocla04517
IgSF CAM signaling
ocla04518
Integrin signaling
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139370435
04517 IgSF CAM signaling
139370435
04518 Integrin signaling
139370435
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139370435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139370435
04515 Cell adhesion molecules [BR:
ocla04515
]
139370435
04090 CD molecules [BR:
ocla04090
]
139370435
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139370435
Cell adhesion molecules [BR:
ocla04515
]
Integrins
Integrin alpha subunits
139370435
CD molecules [BR:
ocla04090
]
Proteins
139370435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
FG-GAP_3
FG-GAP_2
Copine
vWA_Rv0959
Motif
Other DBs
NCBI-GeneID:
139370435
NCBI-ProteinID:
XP_070966011
LinkDB
All DBs
Position
17:complement(18456025..18480713)
Genome browser
AA seq
1135 aa
AA seq
DB search
MLVNKVKEKMSRLLLTWMGAMAVSSMAFNIDEANPKIYKGEEKDFFGYKVLQFISGKEKG
VMVSAPYQKNGSGGICRCAQDRTDCTDCYTPQETDTIKYIGLSMAGQSTSPPTFTACSPG
LAHECDGNSYLNSICYQFNSQLQITSNFTPAFQECTKKIVDLVFLFDGSGSMTTDEFDKN
KGFINNIMTTLKNSSIKFAAVQFSSRSRTVFNFNDYKEGRALTNLWKEKHMSSLTNTHQA
IDFLLKNIFENQAAGATADATKVLVIITDGDPSDTDKRFNSIKRSDDKNIIRFVIGVKNV
DLTKLKSLASEPKENNTFLIQDYNGLKGILDNLQKKIFNIEGSKTALAGNLMKEMSQSGF
SAVYVNKDTLVLGSVGSNNWRGSLFETEGQRSEEREIQDPTLDKDSYMGYSVAVGKKNQN
LLYFTGAPRSEHMGRILLFNKVNNNWTVAQRLSGEQMGSYFGAELCSVDIDSDGNTDFLL
VGAPMFHQPPREGRIYVYTLTDKLELRMEMNVSVMAQGRFGSSISSLTDLNGDGLKDVAV
GAPLEDDHRGAVYIYLGEKLKGIRPEFSQRISAAMMRSKLQFFGQTIDGKMDLGEDGLTD
IVVGTRGAVVVLRSRPVLSISAHLHFHPSEISTVNFYCLAKETISPVVTLTACFNMAEAT
KSKAGALSAGMNVSYTLDVDPVRQRSRAFFNDTNKGARSLLSTVELRKERTCFNHSVYMT
QCVIDTLSAIIIQLNFSQSQSQQEGCTAILNTDSPAKAVVEVPFEKNCKENETCLAELEV
DFNFITSTLLVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGLSFSTMHLLKSTRRTVFS
CGGLEGEMDRTTCSVSIPVYRSKTTAVFTSKFHILNTYNWNNTMEMTVIGLSDNGNSTNS
SLTRTIPVQFAVDLVAKALPQDSTTYMNFTLEDTSPKRLVNVYEVQNLGFKSVPITVTFT
FPTKLEHRFEMKDYKISVLQNHTQCGKVINSTTEYCSPEKYCKSIECESFLLEKFLTVTF
VLSGNVSFKDLDQHAKNLSLPKKFTGDRETVNFISFVKLGYDKKRYAQTASDPGDNSSFH
QTQINVQAEIIIHPQRELILGTGVGLFLLIIITMAMYMMGCFQRKSPDYDENEGE
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgaacaaagtgaaggagaagatgtccaggctcctgctcacctggatgggagcc
atggctgtctcttcaatggctttcaacattgatgaagcaaacccaaaaatctacaagggg
gaggaaaaggatttctttggatacaaagtcctgcaattcatatctggcaaggagaaaggg
gtaatggtcagtgctccatatcagaagaacggatctggtggaatctgtagatgtgctcaa
gacagaacagactgtacagactgttacactcctcaagaaactgacacaatcaagtacatt
ggactctctatggctggacaatctacttctcctccaacattcactgcctgcagccctggt
ctggcacacgagtgtgatgggaactcatatctgaacagtatctgttatcagttcaacagc
cagctccagatcacctcgaacttcacacctgccttccaagaatgtactaagaaaatagtg
gacctcgttttcctctttgacggatcaggaagcatgacaacggatgaatttgataagaac
aaaggtttcataaacaatatcatgacaaccctaaaaaactcctcaatcaagtttgcagca
gttcagttctcatcaagatccaggacagttttcaacttcaatgactacaaagaggggaga
gccttgactaatctttggaaagaaaagcacatgtctagtctaaccaacacacatcaggcg
atagactttcttttgaaaaacatttttgaaaaccaagccgccggcgccaccgcagatgca
actaaagtactggtcataataacagatggagatcccagtgatactgataaaaggtttaac
tctatcaaaagaagtgatgacaaaaacatcatccgtttcgttattggggtcaagaatgtc
gatttgacgaaactaaagtcactagcatcagagccaaaagagaacaacactttcctcatc
caggactacaacggactaaaaggaatcctagacaacttacaaaaaaagatcttcaacatt
gaaggttccaagactgctctggctggaaacttgatgaaagagatgtctcagagtgggttc
agtgctgtctacgttaataaggacaccttggttttgggctcagtgggatcaaacaactgg
cgtggatccctctttgagactgagggtcagagatcagaggaaagggaaattcaggacccc
acattggacaaagactcctatatgggatactctgtagctgttgggaagaagaaccagaac
cttctatattttaccggagcaccaagatctgaacacatgggacggatcctacttttcaac
aaggttaacaacaactggactgtggcacaaagattgtctggagaacagatgggctcctac
ttcggggcagagctgtgttctgtggacatagactcagacggcaacacagacttcctcctg
gtgggtgcaccaatgtttcaccaaccaccgagagagggcaggatctacgtctacacacta
actgataagctggaactgaggatggagatgaatgtttcagtgatggctcagggtagattc
ggctcctccatctcctctctcacagacctgaatggagatgggctgaaggatgtagctgtg
ggcgctccacttgaggacgatcacaggggggccgtgtacatctacctgggtgaaaagcta
aaggggatccgccctgaattcagccagcgcatctcagctgcgatgatgagatctaagctc
cagttctttggccagacgattgatgggaagatggacctgggtgaggatggactgactgac
atcgtagtaggaacgcgtggcgcagttgtcgtcttgaggtccagaccggtcctcagcatc
tctgctcatctccacttccatccctcggagatcagcactgttaacttttactgtctggca
aaagagaccatttcccctgtggtgactctgacagcctgctttaacatggcagaggcaaca
aagagtaaagctggggcgctgagtgcagggatgaacgtctcctacacgctggatgtggat
ccagtgagacagaggagccgagcctttttcaatgacacgaacaaaggggccagaagtctt
ctctctactgtggagctgagaaaggagcggacctgcttcaaccactcagtctacatgaca
caatgcgtgattgacacattatcggccataatcatccaacttaatttttctcaatctcaa
agccaacaagagggttgtactgccattctgaatactgacagtcctgcaaaggccgtggtt
gaggtgccctttgaaaagaactgcaaagaaaatgaaacctgtttggcagagcttgaggtg
gacttcaacttcatcacatcaactttattagtggtggaccagagttactttaatgtgact
ataagactgtccaatcacggggatgactcctataacaccagtctaaccctcctctaccct
cctggcctctcattctccacgatgcatcttctgaagtctacaaggagaacggtgttcagc
tgtggtggtctggaaggtgaaatggacagaactacatgcagtgtcagcatacctgtctac
cgtagtaaaactaccgcagtgttcaccagtaaattccatattttgaatacatacaactgg
aacaacacaatggagatgaccgtcatcggcctgagcgacaatggaaactcaaccaatagt
tccctaacccggaccatccctgttcaatttgcagttgacctggtagcaaaagcccttccc
caagactccaccacttacatgaactttactctggaggacacatcacctaaaagactggtg
aatgtatatgaggtgcagaacttgggatttaagtctgtacccatcacagtcacattcact
ttcccaactaagcttgagcacagatttgaaatgaaggactacaaaatatctgtcttacag
aaccacactcaatgtggaaaggttatcaattcaacaacagagtactgctctccagaaaaa
tactgcaagtccatcgagtgtgaaagtttccttttggagaagtttttgacagttacattt
gtgctgtctggaaatgtttccttcaaggacctcgatcaacatgcaaagaacttgtcattg
ccaaagaaattcactggggacagagaaacagtcaatttcatcagttttgtcaaactcggc
tatgacaaaaaacgatatgcccagacagcgagtgacccaggggataactcaagcttccac
caaacacagattaatgtccaggctgagatcatcattcatccacaaagagagctgatacta
gggacaggagtaggactctttctcctgatcatcatcacaatggccatgtatatgatggga
tgcttccagagaaaaagccctgattatgacgagaatgaaggggaatag
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