Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370456
Help
Entry
139370456 CDS
T10872
Name
(RefSeq) (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O-like
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139370456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139370456
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
139370456
Ubiquitin system [BR:
ocla04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
139370456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
SH3-A_UBE2O
SH3-B_UBE2O
SH3-C_UBE2O
UQ_con
Motif
Other DBs
NCBI-GeneID:
139370456
NCBI-ProteinID:
XP_070966051
LinkDB
All DBs
Position
17:complement(19532193..19582159)
Genome browser
AA seq
1399 aa
AA seq
DB search
MVTGFSFFFSTIGLPLSHYSLTTAAMAEPVASDAIATDAALSPAVSPGSEPPSMALSPSA
GGSQRLLFSHDLVSGRYRDLVRFGLVRMIQGEEEFDSDSDLDDGGGRGGGGGGCIPCNSD
TESSVVDSLAPLGRGFVRVQWYPEGGKQDIRETKLKLVDRSIVIRDIVRRMNSNDNQCGI
VTDIDIECAVKLVGTNCVLYPVNSKDLHHIWSFMYGDYIAYDFWLGKVYDLTNHIILKLS
NGARCSMNVEDGAKLYDVCPHVSDSGLFFEEAYGFYPGQVLIGPAKVFSNVQWLSGVKPV
LRKKSKFRVVVEEVQVAELKVTWITKSYSPKGTDSVYPPPSTISQENLCRVKRLGYYDHT
QRQLGERALYVFPAKGDTTHITCEWPDGAPGLPEDPVARKLKRMFKKELLGKKPSENADT
QGANQHSTDNTDSLDGDLKPDNTHPDSTNHTALPRPHHPNNGPNHTLQPSPLCPPPSDPW
PEPAEQDADDEAGAEDTDDTLSLTSSASSTASSQSGGLGGLNRKKSIPLSIRNLKRKHKK
KRTKFSREFKPGDRVAVEVVSTKTSADVLWKDGRMETLIRSNDLIPIQHLDNHEFCPGDF
VVDKRPQAPTDPGVYGVIQSGDHKGRTCAVKWIKLNASSDNVEVIGEEEDVSVYDIADHP
DFHFRTTDIVIRIGNSENERNTECENDTSVGQVFRVDVSSKVEVVWADNSMTIVLPQHLY
NVESEIEETDYDSVEESSSGLSTEEWEDESDSWETDNGLTTNEDDQHPANEDTATPAPTG
PSTFIIPPEESGKAGAATPTKPPNAIEDQEGAGAIASPGAGAGAGGTTPGAGGGDAAEKL
PGKDCTPRGFRELKEALKILESLKNMTVEQLWTGGSPTSPTSGATPSANGTNANTATAVT
PEKPTKEKRFLDDIKKLQENLRKTLDNVAIVEEERMEAVVEAGGGGAGGGGSTEGGERGG
EERPQEEVAKTPGAAPEWPSDTPVLCQQSGGKPGVTFTSAKGEVFSVLEWSPDTHTFKKM
EFQPAEAKKFFSTVRKEMALLATSLPDGIMVKTFEDRMDLFSALIKGPTRTPYEDGLFLF
DIQLPNIYPSVPPLFRYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWTSKSSLLQV
LISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIKMVQSMTQLLQTPIEVFQ
QEIRQHFTFNGWRLVHRLDAWLELHELAERGPPPRPSRDRPPSVGPLDETLPLDLLAHST
PNKHQGTGDEELEDSGLSFSTTAASQQELSQNLDCDGTVSASEVAGASVVVSGSVRGAAS
DSAGGSQPAVRPKKRRKSYRSFLPERSGYPDIGFPLFPLSKGFVKSVRCVLLQYRAALAA
TSIPDHVEDNVQSPDRGQM
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggttacaggcttctcttttttcttctccaccatcggtctccctttatcgcattattcc
ctgacaactgcagcgatggcggaacccgtggcatcggacgcaatagcaacagacgcagct
ctttctccggctgtaagcccgggttcggagcctccatccatggcgctctctccttctgca
ggcggctcccagcggcttcttttctcccacgatttggtgtcaggtcggtatcgcgacttg
gtccggttcggcctagtcagaatgatacaaggcgaggaggagtttgattcagactcggac
ctcgacgatggcggaggtagaggcggtggaggaggtggctgtatcccctgtaactcggac
accgagagcagtgttgtggacagtctggctcctctgggaaggggttttgtccgggtgcag
tggtacccagaaggagggaagcaagacatacgggaaacaaagctgaaacttgtagatcga
tccatcgttatccgagacattgtgcggcggatgaattctaacgacaaccagtgtggcatc
gtgaccgacatcgacatagagtgtgctgtaaaactagtggggaccaactgtgtcctgtac
cccgtcaacagtaaagacctacatcacatctggtctttcatgtatggggactacatagcc
tacgacttctggctggggaaggtgtacgacctgaccaaccacatcatcctcaagctgtcc
aatggagccaggtgttccatgaatgtggaggacggcgccaagctgtacgacgtctgtcct
cacgttagtgactcgggtctgttcttcgaagaggcctatggtttctacccaggccaggtg
ctgatcgggccagccaaagtcttctccaatgtccagtggctctccggggtcaagcccgta
ctccgtaagaagagcaagttcagggtggtggtcgaagaggtccaggtggcggagctgaag
gtgacgtggatcaccaagagttactcccccaagggcacggacagcgtctacccccctcct
tctaccatctcccaggagaacctctgcagagtgaagcgtctgggctactatgaccacacc
cagaggcagctgggggagagggccctgtacgtgttcccagccaagggagacaccacacac
atcacctgtgagtggcccgacggagcccctggactcccagaggaccccgtagccaggaag
ttgaaaagaatgttcaagaaggagttgttagggaagaagcccagtgaaaatgcagacaca
caaggtgccaaccagcactccacggacaacacggacagccttgacggtgacctcaagcct
gacaacacccacccagactccaccaaccacaccgcgctcccccgtcctcaccaccccaac
aacggccccaaccacaccctccagccctcgcccctgtgccctcccccttctgacccatgg
cccgagcccgcggagcaggatgcagacgatgaggcgggggcggaggacacagacgacacg
ttgtcgctgacgtcgtcggcgagtagcaccgcgtcgtcgcagagcggcggtctggggggc
ttgaacaggaagaagagcatcccgctgtccatccgcaacctgaagaggaagcacaagaaa
aagaggaccaagttctcccgcgagtttaagcccggcgacagggtagcagtagaggttgtg
tccaccaagacctcggccgacgtcctctggaaggacggccgcatggagacactcatccgc
tccaatgacctcatccccatccagcacctggacaaccacgagttctgccccggagacttt
gttgtcgacaaacgaccccaagcccctacggacccaggtgtgtacggggtcatccagtcg
ggcgaccacaagggcaggacctgtgccgtgaagtggatcaaactcaacgcctctagcgac
aacgtggaggtcataggagaagaggaggatgttagtgtgtacgacatcgccgaccaccca
gacttccacttccgtaccactgatatcgtcatcaggatagggaactctgagaacgagcgg
aatacagagtgtgagaacgatacgtcagtaggccaggtcttcagagtggacgtgagcagc
aaggtggaggtggtgtgggctgacaactccatgaccatcgtcctgccacagcacctgtac
aacgtggagtctgagatcgaggagactgactatgactctgtggaggagagcagcagtggc
ctgtccacggaggagtgggaggacgagagcgacagctgggagactgataacggcctgact
accaacgaggacgaccagcaccccgccaacgaggacaccgccaccccggcccccaccggc
cccagcaccttcatcatcccccccgaggagagcggcaaagcaggggccgccacccccacc
aagccccctaacgccatagaggaccaggagggagcgggggctatagccagcccaggcgcc
ggtgccggtgctggaggaaccacccctggagcaggagggggtgatgctgcagagaagctc
cccgggaaagactgcacgccgcggggcttccgcgagctcaaggaggccctgaagatcctg
gagagcctgaagaacatgaccgtggagcagctatggacgggcggctcgcctacctcgccc
acgtccggtgccacgccctccgccaacgggactaacgccaacaccgccactgccgtcacg
ccagagaaacccaccaaggagaagcgcttcctggatgacatcaagaagcttcaggagaac
ctgagaaagaccctggacaatgtggccatcgtggaggaggagcggatggaggcggtggtg
gaggccggaggaggcggcgcaggaggaggtgggagtacggaaggaggagaaagaggaggt
gaagaaaggccccaggaggaggtggcgaagacgccaggcgcggcaccagagtggcccagc
gatacgcctgtcctgtgccaacagagtggtggcaagcccggcgtcaccttcaccagtgcc
aagggagaggtgttctctgtgctggagtggtcaccagacacccacacctttaagaagatg
gagttccagccggccgaggccaagaagtttttcagcaccgtgaggaaggagatggctctg
ctggccacctcgctgcccgacggcatcatggtgaaaaccttcgaggaccgcatggacctg
ttctcagctctgatcaaggggcccacgcgcaccccttacgaggacggactgttcctcttc
gacatccagctgccaaacatttacccgtctgtgccgcccctcttccgctacctgtcacag
tgcagcgggcgcctcaaccccaacctctacgacaacggcaaggtctgcgtcagcctgttg
ggcacctggatcggcaagggtacagagaggtggaccagcaagtctagcctgctgcaagtg
ctcatctccatccaaggcctgatcctggtcaacgagccctactacaatgaggcaggtttc
gacagtgaccggggcctgcaggaaggctatgagaacagtcgctgctacaacgagatggcc
ctcatcaagatggtgcagtccatgacccagctgctgcagactcccatcgaggtgttccag
caggagatccggcagcacttcaccttcaacggctggcgcctggtgcaccgcctggatgcc
tggctggagctccacgagctagccgagaggggccctccgccaagaccatcccgggacagg
cctccctcagtgggtcctctagacgagacgctccccttggatcttctggcccacagcacc
cccaacaagcaccagggcaccggggatgaagagctggaggactctggcctaagcttttcc
accaccgccgcctcccagcaggagctcagccagaacttggactgcgacggcaccgtctcg
gccagtgaggtggccggggcgagcgtggtggtctctgggtcggttaggggggccgcctca
gactccgcgggcggtagccagccggcggtgcgaccaaagaagcgcaggaagagctaccgg
agcttcctgcccgagcggagcgggtatccagacattggcttccccctctttcctctctcc
aagggctttgtgaagagtgtgcgctgcgtgctgctgcagtaccgggccgccctggccgcc
acctccatccctgaccacgtagaggacaatgtccagagtccagacagaggccagatgtga
DBGET
integrated database retrieval system
