Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370511
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Entry
139370511 CDS
T10872
Name
(RefSeq) vacuolar protein sorting-associated protein 54-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139370511
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
139370511
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Other DBs
NCBI-GeneID:
139370511
NCBI-ProteinID:
XP_070966134
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Position
17:complement(21466472..21484882)
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AA seq
1000 aa
AA seq
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MASSHSSSPVPHPSSGGSEGIFRKDRDPSSRHYRPVHSLPDVCPKEPTGEAARVLCEGPS
VVADQHRWTVYNSKVNLPAALNDPRLAKRESDFFTKTWGLDFAETEVMPSFYLPNITKEH
FGPYLQETAQREKIHERCKSICSNKDELDAVSSITNNHDKSRTELEQVPKIFMKPDFALD
DPTTFNAVLPWSHFNSAGGKSSRDMASSRLLQEKLSHYLDVVEVSIARQISLRSEAFFHA
MSSQHELQDRLTETARAVAVLRGRAAAIERIMCEGPLRALRQALTRSNCARLHNKLKLMA
AVHQSQPTVQLLLSTSEFVGALELIATTKEVLQQELQGIHSFRHLGSQLCEMEKLIDKMM
VGDFSMYSRSDLNRSLEDDGQVMEKWSQMQYKRSVSIKDRLESLVFGLLRQRKLDFLDIY
SDEMILAAKSIVTQSVVDSVSQIEEIDTDIVTKLADQMRLMTFPQWFELLKSVFENFILF
LKRIKVTLSVVRNVVLEALDSNQKSRLLERAAAGGLTEAPGTPLKQEEAELAYLTHEGLF
ISDALNDAQLHLGASTGQEQSSTVGPRQALSRMDGCGSDSASGTTESSSSREHAFQPGGA
AISSSEDMMPSDLELGRVANNIQELLYTASDVSHDRCVKVLMARAKDGSLERLSSAEFVF
LSQAVEGFVRDTEKLCCRRSVSLRGALQSQANRFVHRFHEERKTKLSLLLDNERWKQAEV
PAEFQDLVNSIADGRITLPERKTQGTEERKPSDYLHIDGQKYAVVGTVLLLIRIFLEYCQ
CVNDIPSISTDMLTRLSDLLKHFNSRSCQLVLGAGALQVVGLKTITTKNLALASRCLQLV
VHYIPVIRAHFETKLAPKQYSVLRHFDHITKDYNDHIAEISAKLMAIMDSLFEKVLSKYE
VKAPVPSACFRNVCKQMAKMHEALYELLPEEQAQMLFLRINASFKMHLKRQLARLGVHHD
GGPQHGLVTVDVAFYTENVQSLRALEKLDLNMAEIWEQKR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagccacagctcctccccagtgcctcatcccagcagtggtggcagcgagggg
atcttccggaaggacagggacccttcctcacgacactacaggcccgtccactccctgccc
gacgtctgccccaaggagcccacgggcgaggcagcccgggtgctgtgcgagggcccgtcg
gtggtggccgaccagcacaggtggacggtgtacaactccaaggtgaacctcccggccgcg
ctgaatgaccctcgactggccaagagggagtctgacttcttcaccaaaacctggggcctg
gactttgccgagacagaagtcatgccctccttctacctccccaacatcacaaaggaacac
tttggcccctacctgcaggaaacagctcagagggagaaaatccatgagcgatgcaagagt
atctgttccaacaaggatgagctggatgctgtctccagcatcacaaacaaccacgataaa
tcaagaacagagttggagcaggtgcccaagatcttcatgaagcctgactttgcgctagac
gacccaacgacctttaacgcggtcctaccatggtcccacttcaacagcgctggtgggaag
agcagcagggacatggcatcatcacggttactacaggaaaagctgagccactacctcgac
gtggtggaggtgagtatcgcgcggcagatctccctgcgctctgaggccttcttccacgcc
atgtcctcccagcacgagctccaggaccgcctcaccgaaaccgcccgcgccgtggcagtc
ctccggggccgcgcggccgccatcgaacgcatcatgtgcgaaggcccgctgcgggcactg
cggcaggcgctgacgcgctccaactgcgcgcggctgcacaacaagctgaagctgatggcg
gcggtgcatcagagccagcccactgtgcagctgctgctctccacctcagagttcgttggg
gccctggagctcatcgccaccaccaaggaggtgctgcagcaggagctgcaggggatacac
agcttcagacacctgggctcgcagctgtgtgagatggagaagctgatagacaagatgatg
gtgggagactttagcatgtactccaggagtgacctcaacaggagtctggaggatgacgga
caggtcatggagaagtggtcacagatgcaatacaaacgttcagtctcaataaaggacagg
ctggagtctctggtgtttggcttgctgaggcagcggaagctggattttctggacatctac
agcgacgagatgatcctagcagccaaaagcatcgtcacgcagtctgttgtcgactcggtg
tcgcagattgaagaaattgacactgacatcgtcacgaagctggcagaccagatgcgtctg
atgaccttcccccagtggtttgagctgctgaagtccgtctttgagaacttcattctcttc
ctgaagaggatcaaggtgacgctcagtgtggtgaggaatgtcgtgctggaggcgctggac
agcaaccagaagagccgtctgctggagcgggctgcagcggggggcctgactgaggcccca
ggaacccctctcaaacaggaggaagcagaactggcctacctcacgcacgagggcctgttc
atcagcgacgctctcaatgatgcccagctgcacctgggggcaagcacaggccaggagcag
agctccaccgtggggcccaggcaggccctgtcacgtatggatggttgtggtagtgactcc
gcctcagggaccaccgagtcgtcctccagcagggaacacgctttccagccaggaggggcc
gccatctcgtccagtgaggacatgatgcccagtgacctggagctgggccgcgtggccaat
aacatccaggagctgctctacaccgcctcagacgtcagccacgaccgctgtgtcaaagtc
ctcatggccagagccaaggatggctccctggagcgtctgagctcggcagagtttgtgttt
ctgtcccaggcggtggaaggctttgtgagggacacagagaagctgtgctgcaggcgcagt
gtgtccctaaggggggcgctacagagccaggccaaccgctttgtccaccgcttccacgag
gagcgtaagaccaagctcagtctgctgctggacaatgagcggtggaagcaggcagaggtt
cctgcagaattccaggacctggttaactccatagcagatggcaggatcacactacccgaa
cgcaaaacccaaggcacagaagaaaggaagccaagtgattatttgcacattgatggccag
aaatatgctgttgttggcacggtgttactactgatccggatcttcctggagtactgtcag
tgtgtcaacgacatcccttccatctccacggacatgctcactcgcctctcagacctactc
aagcacttcaactcgcggagctgccagctggtcctgggggcaggagcactacaagtggtg
ggactcaagaccatcaccactaaaaacctggccctggcctctcgctgtcttcagctggtg
gttcactacattcctgtcatcagggcccactttgagaccaagctggcgcccaagcagtac
agcgtcctcaggcactttgaccacatcactaaggactacaacgatcacatagcggagatc
tccgctaaactgatggcgatcatggacagcttgtttgagaaggtgctgtctaagtatgaa
gtcaaggcccccgtgccctcggcctgctttcgcaacgtgtgtaaacaaatggccaaaatg
cacgaagccctttacgagctcctacctgaggaacaggcacagatgttgttcctgaggatc
aatgcaagctttaaaatgcaccttaaaaggcagctggcccgtcttggcgtgcaccacgac
ggtggacctcaacatgggctggtgacggtggatgtggcattttacactgagaatgttcaa
tcactgagggcccttgaaaagctggacttgaacatggctgagatctgggagcagaagagg
tga
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