Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370517
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Entry
139370517 CDS
T10872
Name
(RefSeq) actin-related protein 2-A-like
KO
K17260
actin-related protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
ocla04530
Tight junction
ocla04810
Regulation of actin cytoskeleton
ocla05100
Bacterial invasion of epithelial cells
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139370517
09144 Cellular community - eukaryotes
04530 Tight junction
139370517
09142 Cell motility
04810 Regulation of actin cytoskeleton
139370517
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139370517
05100 Bacterial invasion of epithelial cells
139370517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139370517
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139370517
04147 Exosome [BR:
ocla04147
]
139370517
Membrane trafficking [BR:
ocla04131
]
Others
Actin-binding proteins
Arp2/3 complex
139370517
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
139370517
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139370517
Exosomal proteins of other body fluids (saliva and urine)
139370517
Exosomal proteins of bladder cancer cells
139370517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
139370517
NCBI-ProteinID:
XP_070966147
LinkDB
All DBs
Position
17:21590479..21611268
Genome browser
AA seq
394 aa
AA seq
DB search
MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTAKVGNIEIKDLMVGDE
ASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDSRNCKILLTEPPMNPTKNR
EKIIEVMFETYQFSGVYIAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTR
RLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYVGYNIEQEQKLALETTVL
VESYTLPDGRMIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTINAADIDTRSEFYKH
IVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVDKLSKFKIRIEDPPRRKHMVFLGGAV
LADIMKDKDNFWLTREEYQEKGIRVLEKLGVTVR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggacagccagggaagaaaagtggtggtttgcgacaatgggaccgggtttgtgaagtgt
ggctatgcaggctccaacttcccagagcacattttccctgcattggttggcaggccaatc
attcgctccacagctaaagtgggaaacattgagatcaaggacctgatggtgggggatgag
gcgagcgagctgcgctccatgctggaggtgaactaccccatggagaacggcatcgtgagg
aactgggatgacatgaagcacctgtgggactacacctttggtcccgagaagctcaacatc
gactcgcgcaactgcaagatcctgctcaccgagccgcctatgaacccaaccaagaaccgc
gagaagatcattgaggtgatgtttgagacgtaccagttctctggggtttacatagccatc
caagctgtgctcacactctatgctcaaggtctcctgacgggcgtggtggtggactctggt
gatggcgtcacccacatctgccccgtgtacgaaggcttctccctgccccacctgaccaga
cgcctggacattgcaggacgagacatcacacgctacctcatcaagctgctgttgctgagg
ggctacgccttcaaccactcggcggactttgagacggtgcgcatgatgaaggagaagctg
tgctacgtgggctacaacatcgagcaggagcagaagctggcgctggagaccaccgtgctg
gttgagtcctacacgctccccgacggcaggatgatcaaggtgggaggggagcggttcgag
gcccccgaggctcttttccagccccacctcatcaacgtggagggagtcggggtggcagag
ctcctcttcaacaccatcaatgcagcagacatcgacaccaggtctgagttctacaaacac
atagtgctgtcggggggctccaccatgtaccctggccttccctctcgactggagcgtgag
ctcaagcagctctacctggagcgcgtgctgaagggagacgtggataagctctcgaaattc
aagatccgcatcgaggacccccctcggcgcaagcacatggtgttcctgggcggggccgtg
ctggccgacatcatgaaggacaaggacaacttctggctgacgagggaggagtaccaggag
aaggggatacgtgtcctggagaagctaggggtcaccgtcagataa
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