Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370550
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Entry
139370550 CDS
T10872
Name
(RefSeq) signal-induced proliferation-associated 1-like protein 2 isoform X1
KO
K17702
signal-induced proliferation-associated 1 like protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rap_GAP
SPAR_C
Rap-GAP_dimer
PDZ
PDZ_6
Astro_p19
Motif
Other DBs
NCBI-GeneID:
139370550
NCBI-ProteinID:
XP_070966215
LinkDB
All DBs
Position
17:complement(22950486..23054273)
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AA seq
1748 aa
AA seq
DB search
MSVPSLWTEDIAKLAGVASKPKGSNYFMQSDNLFNKKLQALKGPMGPPNANVQGTPAMPK
MGVRARVSDWPQRKDGWESQPPPRYDSLVPTFQKGPSKLSTEVILQKSQELLSTEIPETK
YPLCDLLSHSPMKGFPGIKRSNSEVTISDIGAEDLDHTTINPNTGATLRREYGSTSSLDK
QGLSGASEGFVGTLRGYHMEDRSDQPSAPPPQSFPELLRLNTTLSPSLQTATQIARGDIV
CIPGYDYVDSSLLYSREREKSFLQRMKAEKADTSIFRRLRNVKSEGEYLDQEDGGRFGRP
LSFQKCFAHYDVQSVLFNISEAVANRADLGRRKNTTTGASAASQCQAPASGLGDSATPIP
ICESPIGSCEELGHKASMDADEGDGKSNTLVLSCPYFRNETGGEGERRVALSKASSASYG
SGDYAPSYGGGGQGYSVESSLSTRCTNAGVSVLEVSRESQAFHRDMYKRYIIEHIDQGAY
YYHKYFYNKDHQNYFGTDENLGPVAVSIRREKLDEGKEGAQYNYRVTFRTSELTTLRGAI
LEDAVPSTAKHGMARGLPLKEVLEYVVPELNIQCLRLATSSPKVPEQLLKLDQQGLSFQH
KVGIMYCQAGQSTEEEMYNNESASPALEEFMELLGQRVRLKGFTKYRAQLDNKTDSTGTH
SLYTTYKDYELMFHVSTLLPYTPNNKQQLLRKRHIGNDIVTVIFQEPGALPFTPQNIRSH
FQHVFIIVKVHNPCTENVCYSVAVTRSKDVPAFGPPIPQGVFFPKSAMFRDFLLAKMMNG
ENAVHKSDKFRAMAMRTRQEYLKDLAENFVSTTPVDSSAAKFSFISLGVKKKERSRPRRN
AHLQSYGAVTWAVVARDFGQSADIGCLLAVSNEFVVLIEEASKEVVFNCYCRDVLGWSST
SGSVRLFYERGECVVFSTQEGCWDDVREIMQRLEIVTRGCETVEMTLRRNGLGQLGFHVN
FEGVVADVEPFGFAWQVGLRPGSRLMEICKVAVATLSHEQMIDLLRTSNTVSVVIVQPHE
DGTPRRSCSEMYRVPVVEYKTTTAAGWHRVSTAPGGGPSMSRASPTQGPSPGQQMFHYAQ
GAISRSTSFDRKQQDGTRVLQEYEISPTASCSSREPGQLYCSSPSNQSTSSDPGPCGTWS
QKAGYINGCQSPALHLDQPSDKEGEGRREGEPKLERTRSAEAKWHHPSTKILNMRERSQP
RQGAKDSPNKYQHSGSSHSSSNTLSSNASSGSSDEKRFGSGDPMDPDALGLIYIKGASTD
SGIDTATCMPPPPPPLPGCSGGGVPGVSAGRPVPQDARGEQWVVEYSGTGGYHGAGTSEE
GLTSQGYSTQATSAGHVTDGSLGDLSEISSMSSGSRHSGSPLERGPKTSTSVDSSQVYIV
SSGGTVTGVGLNAAVHTRKSPGKEYLIGWKKAEDGSPMVDPGRSKDYSGVEGVLSFLLKT
LTLRSRLRAMLGADGQLQQVQPSLTREAFLKMMLPDSPPEDGGRGKSLTGPGGLPMSPRR
SLYRTLSDESLCSSHRKTLSLVSSRSSLLDQALPNDILFSTAAGPYHSTLPPRMNLGHSH
GAPLHKNELWFSDSSLADRCKMADGSLMPLPEAVSGLDWSHLVDAARAFEGLELDKDASR
LCDKDSQKDSLASDQGSLCSMLDVEQAQQAMELSHELSRRVAASEAAALKAGDGSPALLT
GKVLQLEEILRQLQFDLRKEQEDKAMLQEQVQHLRQDNMRLHEESQTAAAQLRRFSEWFL
HSVDNKKP
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcctagcctctggactgaggacatagcaaaacttgctggagtagctagcaaa
ccaaagggctccaattatttcatgcagtcggacaacctgttcaacaagaaactccaagcg
ttaaaggggcctatgggacctccaaacgccaacgtgcaaggaacgccagctatgcccaag
atgggtgttcgggcgagggtgtcggactggccccagcgaaaggatggctgggagtcacag
cctccgccacgctatgacagcctggtgccgaccttccagaagggaccgtcaaaacttagc
acagaggtcatcctccaaaagagccaggagttgctcagtactgagatcccagagaccaag
tatccgctatgcgacctcctgagccactcccctatgaagggcttccccgggatcaagaga
agcaacagtgaggtcaccattagcgatatcggcgctgaggacttggatcacaccaccatc
aaccccaacactggggccaccttgcgccgtgagtatgggagcacatcatctctcgacaag
cagggtctgtccggcgccagcgaaggctttgtgggcaccctgaggggctaccacatggag
gaccgctcggaccaacccagcgcgcctcctccacagagtttcccggagctgctgcgtctc
aacaccactctgtcgcccagcctacagacggccacccagattgcgcgaggtgacattgtc
tgcatcccgggctatgactacgtggacagctccctgctctacagccgtgagcgggagaag
tccttcctccaacgcatgaaggcggagaaggccgacacctccatcttccggaggctgcgg
aacgtgaagagcgagggcgagtacctggaccaggaggacggagggcgcttcggaaggccc
ctgagcttccagaagtgcttcgcccactacgacgtgcagagcgtcctcttcaacatcagc
gaggcggtggccaatcgcgccgacctgggtcgcaggaagaatactaccactggggcatcg
gccgcctctcagtgccaggccccggcttctgggctgggagacagcgccacgccaattccc
atttgtgagtctcccataggcagctgcgaggagctgggtcacaaggccagcatggacgca
gatgagggggatgggaagagcaataccctggtgctcagctgcccgtacttccgtaacgag
actggtggcgagggcgagagaagggtggccctgagcaaagccagcagcgccagctatggg
agtggagactatgctcctagctatgggggtggaggacaaggctactctgtggaatcatcg
ctcagcacccggtgcaccaacgcaggggtgtcggtgctcgaggtgtcaagggagagccag
gccttccacagggacatgtacaagcgctacataattgaacacattgaccagggggcttac
tactaccacaagtacttttacaataaagatcaccagaactactttggcactgatgagaac
ttgggccccgtggcggtcagtatccgccgggaaaagctggatgagggaaaggagggagca
cagtacaactaccgggtcaccttccggaccagcgagctcaccactctccgaggggccatc
ctggaagacgccgtgccctccaccgccaagcatggcatggccaggggcctaccgctgaag
gaggtgctggagtatgtggttccagagctgaacatccagtgtctcaggctggccaccagc
tcgcccaaggtccctgagcagctcctcaagctggaccaacaggggttgagcttccagcac
aaggtgggcatcatgtactgccaggcgggccagagcaccgaagaggagatgtacaacaat
gagagcgccagccccgccctggaggagttcatggagctgctgggccagagggtcaggctg
aagggcttcaccaagtaccgggcccagctggacaacaaaacggattccactggaacacat
tctctctacactacttacaaagactatgagctgatgttccacgtgtccacactgctcccc
tacacccccaacaacaaacaacagctactgaggaagagacacattggaaatgacattgtc
accgtcatcttccaggaacctggcgctcttcccttcactccccaaaacattcgctcgcac
ttccagcacgtgttcatcatcgtcaaagtccacaacccttgcacagaaaatgtttgctac
agtgtggcggtcaccagatctaaagacgtgcccgccttcggtcctcctatcccccagggg
gtgttcttcccaaagtcggccatgttccgggacttcctcctggccaagatgatgaacggc
gagaatgcagtgcataagtcggacaagttccgcgccatggccatgcgcacgcgccaagag
tacctgaaggatttggctgagaactttgtaagcaccacccccgtggactcttcggcggcc
aagttcagcttcatctcgttgggtgtcaagaagaaggagcgcagccgaccccggcgcaac
gcccacctccagagctacggggcggtcacttgggccgtggttgcccgggactttggccag
tcagcagacattggctgcttgctggccgtctccaatgagtttgtggtgctgatcgaagag
gcgtccaaggaggtggtgttcaactgctactgccgcgacgtccttggttggagctcaaca
tccgggagcgtccggcttttctacgagcgaggcgagtgtgtggtgttctccacgcaggaa
ggatgctgggacgatgtccgggagatcatgcagaggttggagattgtcacccggggctgc
gagacagtggagatgaccctccggcgaaacggtttgggccagctgggattccacgtcaac
ttcgagggtgtggtggcagacgtggagcccttcggcttcgcctggcaggtgggtctccgt
ccgggcagccggctgatggagatctgcaaggtggccgtggccacactgtcccacgagcag
atgatcgacctgctgcgcacgtccaacacggtcagtgtggtcatcgtccagccccatgag
gacggcacacccaggaggagctgctcggagatgtaccgcgtccccgtggtggagtacaag
accaccacggccgccggctggcaccgcgtctcgaccgccccaggtggcggcccgtccatg
tcccgggcctcccccacacagggccccagccccgggcagcagatgttccactacgcccag
ggggccatctcccgcagcacctccttcgacaggaagcaacaggacgggaccagggtactg
caggaatatgagatatcccctacggcctcctgtagcagtcgggaacctggacaactgtac
tgcagctcccccagcaaccagtccacgtccagtgaccccggaccctgtggcacctggtcc
cagaaggctggatacattaacggatgccagtcacctgcactgcacctggaccagccgagc
gacaaggagggagagggccggagagagggggagccgaagctggagaggaccagatcagca
gaggccaagtggcaccatccctccacgaagattctgaacatgagggagagaagccagccg
agacaaggagcaaaggactcccccaataaataccaacattctggctccagtcactccagc
agcaacactctctccagcaatgcctccagtggcagcagcgacgaaaagcgctttggctct
ggcgaccccatggaccccgatgccctgggcctcatctacatcaagggcgcgtccaccgac
agcggcatcgacacggcgacttgcatgcccccgccgcctccccctctacctggctgcagc
ggaggtggcgtaccgggggtctcggccggccgaccagtcccccaggatgcccgaggggag
cagtgggtagtggagtactccggaacggggggctaccacggagcggggacgtcagaagaa
gggttgacgtcacaaggctatagcacccaggccacttcggctgggcacgtaacggacggg
agcctgggcgacctgagtgagatttcctccatgtccagtggctcacgacactctggcagc
cccttggaacgtggtcctaagacctccacctcggttgactcttcccaagtctacatcgtc
tcctccggtggcacggtgacaggggtggggcttaatgctgccgtccacacccgcaaatca
ccaggcaaagagtatctgattggctggaagaaagctgaggatggctctccaatggtggat
ccgggcaggtcaaaagactacagtggagtggaaggcgtattgtctttcctactaaagact
ctaacactgagatccaggctgcgggccatgctgggtgcagacggccagctccagcaggtc
cagcccagcctgaccagagaggccttcctgaagatgatgctgcccgacagtccccccgag
gatgggggtcgtggcaagagtctgactggtcctggcggcctgcccatgtccccgaggagg
tccctgtaccggaccctgtcggacgagagcctgtgcagcagccacaggaaaaccctgtcc
ctggtcagctcccggagctctctactggaccaggccctgcccaacgatatcctgttcagc
actgccgctgggccctaccacagcaccctgccacctcgcatgaacctcggccacagccat
ggggcgccgctacacaagaatgagctgtggttctctgacagctccctggctgaccgctgc
aaaatggccgatggcagtctgatgccactcccggaagcagtgtctggcctggactggtcc
catcttgttgatgccgcaagggcttttgaaggtctggagctcgacaaggatgccagtcgt
ctgtgtgataaagacagtcagaaagactcactagcatcggaccagggttcactctgctcc
atgttggacgtggagcaggcccagcaagccatggagctctcccatgagctgagtcggagg
gtggctgcgtccgaggccgccgctctgaaggcaggggatggctctcctgctctgctcacg
ggcaaagtcctccaactggaagagatcctcagacagcttcagttcgacctcagaaaggag
caagaggacaaggccatgttgcaggagcaggtccagcacttgcgtcaggacaacatgcgt
ctgcacgaggagagccaaacggcagccgctcagctcaggaggttcagtgaatggttccta
cactcggtcgacaacaagaagccctga
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integrated database retrieval system