Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370560
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Entry
139370560 CDS
T10872
Name
(RefSeq) peroxisomal ATPase PEX6
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
ocla
Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139370560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139370560
Membrane trafficking [BR:
ocla04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
139370560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_33
DPBB_PEX6
AAA_22
ABC_tran
AAA_5
nSTAND_NTPase5
DUF815
RuvB_N
nSTAND3
TIP49
Mg_chelatase
RNA_helicase
TsaE
Vps4_C
AAA_25
AAA_14
PEX6_vert_N
AAA_24
AAA_28
NPHP3_N
IstB_IS21
AAA_17
Parvo_NS1
AAA_chap_2nd
Motif
Other DBs
NCBI-GeneID:
139370560
NCBI-ProteinID:
XP_070966234
LinkDB
All DBs
Position
17:complement(23762361..23776706)
Genome browser
AA seq
1089 aa
AA seq
DB search
MAAQVELSCLDTFPTHLNPLHVLVIKSQFRYAFPSCNEPTSTLLFTSRKLQTLGKTAVLL
CAHSTEEASGCGSDGNDTTLKLYTSKIFLKHYGLQDDIRGVVRSLSPFSLRKVVIGARTR
QSFKWANSEKFSNGLLVLASCQGQPLLARQGDSLSLPYHPLLGDDISQVQHSLFDLVVLE
CTPITQGMITINTTVVVTDCRDIAQHGALETSNALATRNLTSLFVSDFAHYANSLGGGSS
LLDNRQVLDSSLSAFLQALECRLDVRIVDIRRLYRQGRIVLVDKRDAKIDLDSTVFVSKQ
LLLKLGLFNREWVVVSRFNCSSEMTKTSYRGESLPSLGQADDNAPGKEPSKGTEMVHLGS
VVVADFSKCAELDLQDNVGFISPTHWFNLSNGEPVPVSSRAVKIKRWNRVVSQSGLQLSE
SLSRSASPLLAKELHIDAVISPEYSSHGPFDSILCEHFTIPRLVQLGGVLGIPSEGHPEV
LESNSEGITRWPVVYFKVKKVCGSTEEEDQGPYLADTVHTSLYMGGSTNSLAPCSLVGEE
PSLWTSLSPPGLSSTVDQFSTIIQPHMNESSAALMSGCTILLLGPSGSGKFTSVRAACRR
LHLHLVKVDCVTLCADTAASCEAKMKSVFQRAEAHRPCILLLRNLQLLGQPRDGAEEDAR
VIAALCQFIAHAPASVVVVAAVSKPRELSSDVMAAFIHQVSIESPSEEQRRAMLASLSEG
MPLGRDVNLARLAKHTAGFLLGDLSALLTQAGKSAHARILQSCFPEGASVQEEEDLCACG
VTVLAQDFTNALETLQDAHSQAIGAPKIPSVRWQDVGGLQQVKREILDTVQLPLERPELL
SLGLRRAGLLLYGPPGTGKTLLAKAVATECSMTFLSVKGPELINMYVGQSEENVREVFSK
AQAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRP
DLLDQSLLRPGRFDKLVYVGINEDKESQLQVLKAIVRKFKVDPSVSLQDIVERCPPQLTG
ADMYALCSDAMMSAIKRKIARVTDGLDTEDTPLILSAEDFNQALDCLKPSVSEQELLKYK
LIQQKLTAK
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcaggtagaactgtcatgtttagatacatttccaacgcacttaaatccttta
cacgtgcttgttatcaagtcacaatttagatatgcgtttccaagttgcaatgagcctact
tcgacccttttattcacctcacggaagcttcagacactcgggaaaactgccgttttgctc
tgcgcgcactcaacagaggaggcgtcaggttgtggatcggatggaaacgacacaacttta
aaactgtacacaagtaagatctttctcaaacactatggtctccaggatgatataagggga
gttgtacgctcactgtcaccgttttcccttagaaaagttgttataggggcacgaacaaga
cagagtttcaagtgggcaaactcggaaaagttttccaatggacttctcgtactggcttcg
tgccaaggtcaaccactattggcacgacaaggggactcgctatcacttccctatcaccct
ttacttggagatgatatatctcaagtgcaacactctctgttcgacttagttgtgttggag
tgtacacctataacgcaggggatgataacaatcaacacaacagtggtggtcaccgactgc
agagacattgcgcaacatggtgcactggagacctcgaatgctttggctactagaaatttg
acctcgctatttgtctctgattttgcacactacgcgaatagtcttggcgggggaagctct
ttacttgacaacaggcaagtattggactcgagtttatccgcttttttgcaagcactggag
tgtaggctggatgtcagaatcgtggatattcgtcgcttgtaccgtcaagggagaattgta
ctagtggataagcgcgatgctaaaatcgatttagacagtactgttttcgtaagcaaacag
ttgctgctcaaactcgggttattcaaccgtgagtgggtagtggtgtctaggtttaactgc
tcatcagaaatgacaaagacgtcctacagaggcgagtcccttccaagtctcgggcaagcg
gatgataacgcacctggcaaagagccatctaagggcaccgaaatggtccacctcggctcg
gttgttgtggcagatttcagcaagtgtgcagagttggaccttcaagacaacgttggcttc
atatcgccgactcattggttcaacttgtcgaacggagagccagtgccagtcagtagcaga
gctgtgaaaataaagagatggaaccgggtcgtttctcagtcaggtcttcagctttctgag
agcctctctcgatcagcatcaccgctgttagccaaagaactccacattgatgctgtcatc
tccccagaatacagttctcatggtccctttgacagtatcctctgtgagcactttaccata
ccaagacttgtgcagctgggtggtgttttgggcatcccatctgaagggcatcctgaagtc
ttggagagcaactctgagggaatcacaaggtggccggttgtgtatttcaaagtgaaaaag
gtttgtggctctacagaggaggaagaccaaggtccttaccttgcagacactgtccacaca
tctctatacatgggcggctccaccaatagcctggctccctgttcccttgttggcgaggag
ccttccctctggactagcctgtctccccctgggctctccagcaccgtggaccaattctcc
actatcatccagccccacatgaatgaaagctctgctgctctgatgagcggctgcaccatc
ctcctcctgggaccgagtggcagtggaaaattcacctctgtcagagctgcatgccgtaga
ctccatctgcacttagtgaaggtggactgcgtgaccctctgcgccgacacagccgcctcc
tgtgaggcgaagatgaagtctgtcttccagcgagctgaggcccaccggccgtgcatcctg
ctgctcaggaacctgcagttgctgggccagcccagggatggcgccgaggaggatgccagg
gtcatagccgccctgtgccagttcattgcccacgcccctgccagcgtggtcgtggtggcg
gcggtgagtaaaccccgggagctgtcgtctgacgtgatggcagcctttatccaccaggtg
tcgatagagagccccagtgaggagcagcgccgggccatgctggccagcctcagcgaaggc
atgcccctgggaagggacgtcaacctggccaggctggccaagcacactgcgggcttttta
ttgggggacctcagtgcactgctgactcaggctggtaaatctgcccacgcaaggatactc
caatcctgtttcccagagggggccagtgtgcaggaggaagaggacctctgtgcctgtggg
gtaaccgtcctggcccaggacttcaccaatgccttggagaccctccaagacgcccactct
caggccatcggagccccgaagatccccagtgtgcgctggcaggacgttggtggcctgcag
caggtgaagcgggagatcctggacacggtgcagctgcccctggagaggcccgagctgctg
tccctgggcctgcgccgcgccggcctgctcctctacgggcctcccggcacaggcaagacc
ctgctggccaaggctgtggctacagagtgctccatgaccttcctcagtgtcaaaggcccg
gaactcatcaacatgtacgtgggtcaaagcgaggagaacgtgagagaggttttctccaaa
gctcaagcggcggccccttgtatcatcttctttgacgagctggactctctagcgcccaac
agagggcgcagtggagactctggtggagtcatggacagggtggtctctcagctcctggct
gagcttgacggacttcactcctctggggacgtgtttgtgattggagccaccaaccggcca
gacctgctcgatcaatcattgctcagacctggcaggtttgacaaattggtgtatgttggg
atcaatgaagacaaagagtctcagctgcaagttctgaaggccatagtcagaaagttcaag
gtggaccccagcgtcagtctccaggatatagtggaacgctgccctcctcagctcacaggg
gcggacatgtatgctctctgctccgacgccatgatgtctgccattaagaggaagattgca
cgtgtcaccgacggtctggacaccgaggatactcctctcatactctctgccgaagacttt
aaccaagcattggattgcctcaaaccgtccgtctctgaacaagagctgctcaaatataaa
ctcattcagcagaaactcactgcaaaataa
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