Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370565
Help
Entry
139370565 CDS
T10872
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139370565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139370565
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
139370565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
139370565
NCBI-ProteinID:
XP_070966241
LinkDB
All DBs
Position
2:complement(58408953..58433738)
Genome browser
AA seq
551 aa
AA seq
DB search
MEDDSPTLKPRRIQNQNVVHRLERRRIFSGRAAAHWYRGRCFHQNLFPNFTVVNVEKPPC
FLRKFSPDGRCFIAFSSDQTSLEIYEYQGCHAAEDLLLGQDGETLANGNDQRSLNIRGRL
FERFFSLLHVTNVASNGEHLNRECSLFTDDCRYVIVGSAVYVPEEPSPHFFEVYRNNESV
TPNPRSPLEDYSLHVIDLHTGRLCDTRSFRCDKIILSHNQGLYLYRNILAVLSVQQQTIH
VFQVTSEGLFLDVRTIGRFCYEDDLLTLSAVYTEARAEGQPGFSRLYKEKTINSLKHRLL
VYLWRRAEKDGSATAKRRFFQFFDQLRQLRMWKMQLLDEHHLFIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTEVLAVFENTSDKLLELFENFCDLFRNASLHSEAVQFPCSASSNNFAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPINHAVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHVCV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgattccccgactctgaaacccaggcgcatccagaaccagaatgtggtccat
cgactggagcggcggcggatcttctctggccgggctgcagcccactggtaccgcgggcgc
tgcttccaccagaaccttttcccaaacttcactgtggtaaatgtagagaagcctccttgc
ttcctacgcaagttctccccagatggacgctgcttcatagccttctcctctgaccagacc
tctttggagatctatgagtaccagggctgccatgcagcggaggatctgctgctggggcag
gatggggagaccctggccaacggcaatgaccagcgctccctcaacatccgcggccgcctc
tttgagcgcttcttttccctcctgcacgtcactaacgtggcctccaatggggagcacctg
aaccgagagtgcagcctgttcactgatgactgtcgctatgtgatcgtgggctcagcggtc
tacgtgcccgaggagccatctccacacttctttgaggtgtaccgcaacaacgagtctgtg
actcccaacccccgctctcctctggaggactactcactgcacgtcattgacttgcacact
ggccggctttgtgacaccaggtcttttaggtgtgacaagatcatcctctcgcacaaccag
ggactctacctctaccgtaacatactggctgttctttctgttcagcagcagacaatccat
gtctttcaggtgacatcagaggggttgtttctggacgtgcggaccatcggtcgtttctgc
tacgaggacgacctcctgactctgtctgcggtgtacactgaggcccgggccgagggccag
ccaggcttctcccgcctctacaaggagaagaccatcaactccctgaagcacagactacta
gtctacctgtggagacgggctgagaaggacggcagcgccaccgccaagcgacgcttcttc
cagttctttgaccagctgagacagctgaggatgtggaagatgcagctgctggatgagcac
cacctcttcattaaatacaccagcgaggatgtggtcaccctgcgagtcactgacccctcc
cagccctcattctttgtggtgtacaacatggtgtcgacagaggtgttggcggtctttgag
aacacttctgacaaacttctggagctgtttgagaacttctgtgacctgtttcggaacgct
tcgctccacagcgaagctgttcagttcccctgctcagcctccagcaacaactttgcacgg
caggttcagagaaggttcaaagacaccatagttaatgcaaagtatggcggtcacactgag
gcggtgaggaggctgctgggacagctgcccattagtgctcagtcctacagcagcagtccc
tacctggatctttccctgttcagctacgacgacaagtgggtatctgtgatggagcggccc
aaaacatgtggagaccaccccatccgattttatgctcgagactctggattgctgaagttc
aagatccaggcaggcctgctgggccggcccattaaccatgccgtccggcggctggtggcc
ttcacattccacccctttgagccgttcgccatctcagtacagaggaccaacgctgagtat
gtggtgaatttccatatgcggcacgtctgtgtatga
DBGET
integrated database retrieval system
