KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370593
Entry
139370593         CDS       T10872                                 
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3B
  KO
K10435  microtubule-associated protein 1 light chain
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137  Mitophagy - animal
ocla04140  Autophagy - animal
ocla04216  Ferroptosis
ocla04371  Apelin signaling pathway
ocla04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    139370593
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    139370593
   04137 Mitophagy - animal
    139370593
  09143 Cell growth and death
   04216 Ferroptosis
    139370593
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    139370593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocla04131]
    139370593
   03029 Mitochondrial biogenesis [BR:ocla03029]
    139370593
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocla04812]
    139370593
Membrane trafficking [BR:ocla04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    139370593
Mitochondrial biogenesis [BR:ocla03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Other mitophagy factors
    139370593
Cytoskeleton proteins [BR:ocla04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule-associated proteins (MAPs)
     139370593
SSDB
Motif
Pfam: ATG8 APG12 Peptidase_M26_C
Other DBs
NCBI-GeneID: 139370593
NCBI-ProteinID: XP_070966280
LinkDB
Position
2:58456106..58461916
AA seq 125 aa
MPSEKTFKQRRTFEQRVDDVRLIREQHPNKIPVIIERYKGEKQLPILDKTKFLVPDHVNM
SELIKIIRRRLQLNSNQAFFLLVNGHSMVSVSAAIAEVYDREKDDDGFLYMVYASQETFG
TITPQ
NT seq 378 nt   +upstreamnt  +downstreamnt
atgccttcagagaagacgttcaaacaaagaaggacatttgagcagagagtagatgatgtg
agactgattcgagagcagcaccccaacaagatcccagtcatcatcgagagatacaaggga
gagaagcagctgcccatcctggataaaaccaagttcctggttcctgaccatgtcaatatg
agtgagctgatcaaaatcatcaggaggcgcctccagctgaactccaaccaggccttcttc
ctgctggtgaacggccacagcatggtctccgtgtcggcagccatcgctgaggtgtacgat
cgcgagaaggacgatgatggcttcctctacatggtgtacgcctcgcaggagacctttgga
accataaccccccagtaa

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