Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370687
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Entry
139370687 CDS
T10872
Name
(RefSeq) vesicle-associated membrane protein-associated protein B-like isoform X1
KO
K10707
vesicle-associated membrane protein-associated protein B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139370687
Membrane trafficking [BR:
ocla04131
]
Autophagy
ER-phagy
Other ER-phagy associated proteins
139370687
Other autophagy associated proteins
ER-mitochondria tethering complex
139370687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Motile_Sperm
Ig_CFAP65_7th
EMC3_TMCO1
ZapB
Ig_CFAP65_4th
Cep192_D6
Cep192_D3
DUF6366
HYDIN_VesB_CFA65-like_Ig
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
139370687
NCBI-ProteinID:
XP_070966412
LinkDB
All DBs
Position
17:complement(29157108..29201344)
Genome browser
AA seq
272 aa
AA seq
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MAWSPQYPDLNQIQMVWDESDRRVKEKQPTSAQHMWEHFQDCWKSIPGPFSDVVNTTLKL
SNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGTSINISVMLQPFDYDPNEKSKHKFMVQS
MLAPPEMTDMEGVWKEAKPEELMDSKLRCVFELPAENEKTHHDLDANKMMSSNLLKSESS
TLSMKSMSSTLDDGEVKKIMEECKRLQMEAQRLREENKQIREDDGLRMRKSSMMSSQHSS
HSMVKEEGLSLRTVALIVLFFVVGVIIGKLVL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcctggtctccacaatacccagacctcaaccaaattcagatggtttgggatgagtca
gaccgcagagtgaaggaaaagcagccaacaagtgctcagcatatgtgggaacactttcaa
gactgttggaaaagcattccaggtcccttctcggatgtggtcaacacaaccttaaagctc
tccaaccccacagacaggaatgtgtgcttcaaagtcaagacgacagccccgcgccggtac
tgcgtccggccaaatagcggtgtcatcgacgccggcacctcaatcaacatctcagtgatg
ctgcagcctttcgactacgatcccaacgagaaaagcaaacacaagttcatggtgcagtcc
atgttggctccccccgaaatgacggacatggagggagtgtggaaggaggcaaagccagag
gagctgatggactccaagctgaggtgtgtctttgagcttccagcggagaacgagaaaacg
caccatgacttggacgccaacaagatgatgtcgtccaacctgcttaagtcggagtcatcc
acactgtccatgaagtccatgagctccaccctggacgatggcgaggtgaagaagatcatg
gaggagtgtaagaggttgcagatggaggcacagcggctacgggaagagaataaacagatc
agggaagacgatggcctgcggatgaggaagagcagcatgatgtcctcccagcactcctcc
cactccatggtgaaagaggaggggctgagcctgcgcacggtggccctcatcgtgctcttc
ttcgtggtcggagtcattatcggcaagttggtcttgtaa
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