Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370693
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Entry
139370693 CDS
T10872
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
ocla04218
Cellular senescence
ocla04350
TGF-beta signaling pathway
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
139370693
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GFIT
Other DBs
NCBI-GeneID:
139370693
NCBI-ProteinID:
XP_070966423
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Position
17:complement(31235527..31293553)
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AA seq
1056 aa
AA seq
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MRGDESDSDSGRTDESSVRKSLEMLCQELNMDEQTASEAMQNFKSIWNTYTLEGEVVHWL
ACSLYAACRKGSTPTVGKGVMEGNCVSLTRILRTSKLSLIQFFNKMKKWSDMSNLSQEFR
NRMGRLERTFEVSTVIFRKFEPIFMDMFQDPQGEPPRQPRSRKHRRMPCHVSDVFKFCWT
LFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCSNRNDLVNPLFKGMPSIFRLENN
TPDEPPCVIDRLCELHDGLVVEAKGIKEHYFKPYIKRLFERQILKGNEELLTDLLDTPNF
IDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKAAPEPRACQLSARMQVESNL
QQHFEKKRTLAPSTPLTGRRYLKEKELLVTPVSSATQSVSRLQSMVSGLRSAPSEALMQI
FKSCSRDPIVAILSRVKTLGETFKQHYTKDSEELPGSHMDFAENRMKLAEILYYKILENV
MAQETRRLHGKDMAVLLEQDIFHCSLMACCLEVVLFAYSSQRTFPWIISIFKLRPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLECRAWTADSVLWEALEQAHNKVPTVEEVNFPS
SFDTGSSSAGPSHLPLVALSPIIHPRIREFRTGLSSARKDIPPSPLSVHDRYSSPAAGSA
KRRLFGDDSSSQAQQSPSLAKRLMFTPGGTLKIDTPTILNMTTANGQQLSIPLQGIKNDL
GGITLIQVQTRGEPGSPITAQVLLTASPSRPIPAPQAQPDPQQSRPRRTGSLALFFRKVY
HLASVRLRDLCVRLDISAELRGKIWTCFEHSIVQCPELMKDRHLDQLLLCSIYIISKITK
EGHTFQDIMKCYRSQPQASSHVYRSVLIRPSSTREQPSDENMEVDPSGGTSLISAAEKAD
QSSREEDLAQGEERGDLIQFYNSVYVLKIKGFALRYAAPSMDNRMEAPPLSPFPSMRAQP
LSPRRISQRHSIYVSPHKNGSCLTPNSAYTYKINGSPSKELTDINRMIRQGGVSRKRAFS
MEGDYLGESPTKRVCPESEDVLLKRLQDVVSERAHH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgcggggagacgagtcagattccgactccgggcggacggacgagagctccgtccgaaag
agcttggaaatgctttgtcaggagctgaatatggacgaacagacggcatctgaagccatg
caaaacttcaagtcgatttggaatacatacacactggagggggaagtagttcattggcta
gcctgctctctctatgcagcctgcagaaagggctccacacccactgtgggtaagggggtg
atggaaggcaactgtgtgtccctgactcgaatactcaggacgtcaaaactgagtttgatt
cagttcttcaacaagatgaagaaatggtcggatatgtccaacttatctcaggaatttcgg
aatcgcatgggccgcctggagagaacctttgaagtgtcaactgtgatctttcggaagttt
gagcccatattcatggacatgttccaggatcctcaaggggagcccccacgacagcctaga
agcagaaaacacaggcgcatgccctgtcacgtcagcgacgtattcaaattctgctggacc
ctgtttgtgtacactaaaggaaatttccgtatgattggcgatgacttggtgaactcatac
cacctcctgctctgctgcttggacttggtgtttggaaatgccctgctatgctccaacagg
aacgaccttgtcaacccacttttcaaaggcatgcccagcatcttcaggttggaaaacaac
accccggacgagccgccatgtgtcatcgatcggctgtgtgagctacacgacggcttggtg
gtggaggcgaagggcatcaaggagcactacttcaagccctacattaaaaggctctttgag
cggcagatacttaaagggaatgaggagctgctcactgatcttctggacacaccaaatttc
atagataacaataaagcgataaaccgggagtatgaggagtatgtgctgactgtgggggac
tttgacgagagggtgttcctgggggcggatgccgatgaggagatcgggacacccaggaag
gctgcaccagaaccccgggcctgccagctgtcagcccgcatgcaggtggagagcaacctg
caacagcactttgagaagaagcgcaccctggccccctccactcctctgacaggcaggcgt
tacctgaaggagaaggagctactggtgacccctgtgtcctcggccacgcaaagcgtcagc
cgactccagagcatggtctcgggcctgcgtagcgcccccagcgaggccctgatgcagata
ttcaagtcatgttcgcgggaccccatcgtagccattctgagcagagtgaaaaccctgggc
gagacgttcaagcaacattacacaaaggactcagaggagctgcctggatcacacatggat
tttgctgagaacaggatgaagctggctgaaatcctctattacaagatccttgagaacgtc
atggcccaagagacaaggaggctacacggcaaagacatggctgtgctgctggagcaggac
atcttccactgctctctgatggcctgctgtctggaggtggtgctgtttgcctacagctcc
cagcgcaccttcccctggatcatcagcatcttcaaactacgaccgttctacttcttcaag
gtaattgaggtgttcatccgctcggaagagggcctgtcccgggacatggtgaagcacctg
aactccatcgaagagcaggtgctggagtgccgggcctggacagccgactctgtgctgtgg
gaggccctggagcaggctcacaacaaggtccccaccgtggaggaggtgaacttccccagt
agttttgacacggggagcagtagtgctggtccctcccacctccctctggtggccctttcc
cccatcatccaccctcgcatccgcgagtttaggacgggcctgagcagcgcacgcaaagac
attcctccgtcgcccttatccgtccacgaccgttacagctccccggcggcgggcagtgcc
aagcggcgtctgtttggggacgacagcagcagccaggcccagcagtctccgtcccttgcc
aagaggctcatgttcacacccggcgggacgctgaagatcgacactcccaccatactcaat
atgaccacagccaacggccagcagctcagcatcccactgcaaggtataaagaatgatctg
ggaggcatcacgctgatccaggtacagaccagaggggagcccggcagtcccattacagcc
caggtcctcttgacagcctcccccagccggcccatcccggcaccccaggctcagccagac
ccccaacagagccggccccgacgcaccggctccttggccctcttcttcaggaaggtgtac
cacctggccagtgtgcggctgagagatctgtgcgttaggctggacatctcggcagagctg
cggggcaagatctggacttgctttgagcactccatcgtccagtgtccggagctgatgaag
gacagacacctggaccagctcctcctttgctccatctacatcatctctaagattacgaaa
gaaggccacacattccaggacatcatgaaatgttaccgcagtcaaccacaagccagcagt
catgtctaccgcagtgtcctcatccgacccagcagcaccagagaacagccctcagacgag
aacatggaagtggacccctctggtggaacatccttaatttcagctgctgagaaagccgac
cagagcagcagagaggaggatctcgcccaaggcgaggagcgcggcgacctcatccagttc
tacaactctgtctatgtgctgaagattaagggctttgccctccgatacgccgcccccagc
atggacaacaggatggaggcccctcctttgtccccgttcccctcgatgagagcccagccc
ctgtccccccgccgcatctctcagagacactcgatctacgtgtccccacacaagaacggc
tcctgtctcaccccgaactctgcctacacctacaagatcaacggcagcccctccaaagaa
ctgactgacatcaaccggatgatccgccagggaggggtgagcaggaaaagggccttttcc
atggagggcgactacttgggcgagtcccccaccaaacgggtgtgtcccgagagcgaggat
gtgctgctcaaacggctgcaggacgtggtcagcgagagagcccaccactga
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