Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370700
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Entry
139370700 CDS
T10872
Name
(RefSeq) matrilin-4-like isoform X1
KO
K19467
matrilin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139370700
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
139370700
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Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
VWA_2
cEGF
EGF_CA
EGF_LRP2
EGF
Matrilin_ccoil
EGF_3
hEGF
Plasmod_Pvs28
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
139370700
NCBI-ProteinID:
XP_070966439
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Position
17:31824683..31873359
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AA seq
656 aa
AA seq
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MRQLCVCVSVLLALATMAVARPKEGPEQKCKSGPVDLMFIIDSSRSVRPHEFESMRKFMI
DIIHTLDMEANATRVGVVQYSSQVQNEFSLKTHGKLQGMVKGINEIVPLAQGTMTGLAIK
YVMNHAFTAAEGDRPKVPNVAVIVTDGRPQDRVAEVAAEARDKGIEIYAVGVARADMTSL
RAMASPPIEDHVFLVESFDLIYQFGLQFQDKLCGMDLCLESDHGCEHLCESSPRSFHCLC
LPGYTLNEDGKTCKAIDPCAGGKHDCEQICIPSPGAFTCGCNTGYTLNDDKKTCTMIDMC
AEGKHDCEQICITSLGTFTCNCNTGYTLNDDKITCTMIDPCAEEKHDCEQICIPSPGAFT
CDCSAGFKLHDDKKTCTNLCNTVEHGCEHQCISTPDSYYCICPEGQLLAEDGKGCRTCRS
ANIDLVLLIDGSKSMRPQNFELVKQFVNQVVDSLDVSAHGTRVGLVQYSSHVRTEFALKM
YEKADDIMKAVMNVEYMEKGTMTGLALKHMMENSFSEAEGARKNIPRVGLVFTDGRSQDD
ITEWAKKAKEEGITMYAVGVGKAVEDELREIASEPLDKHFFYTTDFTFINQIAENLKLNV
CAEESQGELEVKDPCACESLVEFQQATMSTLEQLKTKLAGMTAQLEDMENQLLSRK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgagacagctgtgtgtctgtgtgtctgtcctgctagccttggccaccatggctgtggct
aggcctaaagaaggaccggagcagaagtgcaagtctggcccagtggacctcatgttcatt
attgacagctctcgaagtgtgcggccccacgagtttgagtccatgcgcaagttcatgatt
gacatcatccacacgctggacatggaggcgaatgccacccgagtgggcgtggtgcagtac
tccagccaggtccagaacgaattctctctcaagacccatggcaagctgcagggcatggtg
aaaggcatcaatgagattgtccccctggcgcagggcaccatgacgggcctggccatcaag
tacgtcatgaaccatgccttcacggcagccgagggcgaccgacccaaggtgcccaatgtg
gccgtcatcgtaacggacgggcggccccaggaccgcgtggcggaggtagcagccgaggct
cgagacaagggaatcgagatctatgcggtgggcgttgctcgggcggatatgacctcgctg
cgtgctatggcgtcgccgcccatcgaggaccatgtcttcctggtggagtcttttgacctg
atctaccagtttggcctgcagttccaggacaagctctgcgggatggatctgtgcctggag
tctgaccatggctgtgagcacctctgtgagagctcccctcgttctttccactgcctgtgt
ctgccagggtacactctcaacgaggatggcaagacctgtaaagccatagacccgtgtgct
ggggggaagcatgactgtgagcagatctgtatcccctcccctggagctttcacctgcggc
tgcaacaccggctacaccctcaacgacgacaagaagacctgcacaatgatagacatgtgt
gctgaggggaagcatgactgtgagcagatctgtatcacctctctgggcacattcacctgc
aactgcaatactggctacaccctcaacgatgacaagattacctgcacaatgatagacccg
tgtgctgaggagaagcatgactgtgagcagatctgtatcccctcccctggagccttcacc
tgtgactgcagcgctggctttaagctccacgatgacaagaagacctgcacaaacctgtgt
aacacagtggagcatggctgtgagcaccagtgtatcagtacaccagactcctactactgc
atctgccctgagggacagctactggcggaggatggcaagggctgccgaacctgcagatcg
gccaacattgacctggtcctcctcatcgatggctccaagagcatgcgtccccagaacttt
gagctggtcaagcagtttgtcaaccaggtggtggactccctggatgtgtccgcccatggg
actcgagtgggcctagtgcagtactccagccacgtgcgcacagagttcgccctcaaaatg
tacgagaaggcagatgacatcatgaaggcggtgatgaacgtggagtacatggagaagggc
accatgacgggcctggccctcaagcacatgatggagaacagcttctcggaggccgagggt
gcccgcaagaacatccctcgcgtgggcctggtcttcactgacggccgctctcaggacgac
atcactgagtgggccaagaaggccaaagaagaaggaatcaccatgtatgctgttggtgtt
gggaaggccgtggaggatgagctgcgtgagattgcctcagagccactagacaagcacttc
ttctataccactgacttcactttcatcaaccagatagccgagaacctcaagctcaatgtc
tgtgcagaggagagccagggagagcttgaggtgaaagacccatgtgcctgtgagagtctg
gttgagttccagcaagcaacaatgtccactctggagcagctgaaaacaaaactggcgggt
atgactgcacaattggaggacatggagaaccagctgctgtcacgaaaatga
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