Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370703
Help
Entry
139370703 CDS
T10872
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139370703
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139370703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
139370703
NCBI-ProteinID:
XP_070966441
LinkDB
All DBs
Position
17:31907753..31922610
Genome browser
AA seq
869 aa
AA seq
DB search
MAVVIRMQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRN
GGAIKGSKVSLLLSSKTEMQNMIELSRRRFKTGNVEGAAGNGRRPGPPVNTCGRGSLPNT
LQGFSNTTPATVTTAASAHETISNKNVSTFATTGMGNMPPSFSNNFSSPNLTMGSSMRTA
MSSRNSVPPPIHPLTTMPSLPPMPSIPPMPLPPPVSSVPPVPTVSPLTQGPPVLPMSLSH
MGSMPPFNPGVPPPSGLAPNHMFVGHMNPLLNLQAHMKAAIGNSDELYVHLQGLPFSATE
MDIGEFFCGLGVDSIRLVRDNIGRSSGRALAKFFSPQDTFEALKRSSRMLRQRYVDISPA
TESQWMSVSSGGNGVGGQAHSKSSNVPQDQHHRSNMNSASPSTRDHARSRSPHNKEFCVY
LKGLPYEAVNKQICEFFKKLDIMEDRIYIAYGPTGRATGEGFVQLKNEMDYKVALSCHMQ
YMGSRFIQVHPISKKAMFEKIDSIRQRMQGVDKKNNSESGKSPRNCAHISNIPYNVSKKD
VRLFLEGIAVFEESLKVLVDSSGNGLGQAVVQFRVEEDALNAERLHRQKLNGRDAFVHLV
TFEQMKEIERNPPPQVKRGQKFEGNSQGQAHGHAQAQNPIQAQAHPFASITGEEFNFLRN
TVGNLGNGPFAQFTVPGNGIVGPPPLPPFSASLENVALSIPPPMVAGHLPGAVLAPPSFR
PGSNNGPPGFGPEGMRDRPPFDNGSRKSGGHNNRGSGQGRLEVRPQSALGRGPGSDPLRE
QSLGGPGNPCGPTIVKIQNMPFTVTVDEILDFFYGYQVLPGSVCQQFSEKGLPTGEAMVA
FESHEEASSAVMDLNDRPIGARKVKITLG
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcatgcagggtctcccgatagtggcggggaccatggacatacgc
catttcttctctggattgaccatcccagatggtggggtgcatattgtagggggtgaacat
ggtgaggcttttattgttttcgccacagatgaagatgccaggcttggcatgatgcgtaac
gggggagcaatcaaaggttcaaaagtgtcacttttgctgagcagcaagaccgagatgcag
aatatgattgagcttagccgcaggcgttttaaaacgggcaatgtagagggagcagcagga
aatggtagaaggccaggtccccccgtcaacacatgtgggaggggcagtctacccaacact
ttacaagggttcagcaacaccacaccagccaccgtcaccacagctgcctctgcacatgaa
accataagcaacaaaaatgtgtccacgtttgccaccactggcatgggaaacatgcccccc
agtttcagcaacaacttcagcagcccaaatctcaccatgggatccagtatgagaacagcc
atgtcctcccgcaactctgtaccaccacctattcaccctttgacaaccatgccatctttg
ccacccatgccttccataccccccatgccacttccaccaccagtgtcctctgtgcctcct
gttcccactgtgtcacctttaacccaaggcccccctgtccttcccatgagtctgtcccac
atgggctcaatgccaccattcaacccaggtgtcccaccccctagtggactggccccaaat
cacatgtttgttggccatatgaaccctctgttaaatctccaggcacacatgaaggcagca
ataggtaattcagacgagttatatgttcaccttcaaggcctgcccttctcagctactgaa
atggatattggggagtttttctgtgggttaggggtggactccatccgactggtcagggac
aacattggccggagtagcggcagggccctggccaagttcttttcccctcaggacactttt
gaggcgctcaaaagaagcagcagaatgttaaggcagaggtacgtggacatctctccggcc
acagagagccagtggatgagtgtcagcagtggtggcaacggggttggagggcaagcccat
tcaaaatccagtaatgtgccccaagaccagcaccaccgcagcaacatgaattcagcatct
ccttcaaccagagatcatgcaaggtctcgctcccctcacaacaaggagttctgtgtctac
ctaaaaggcctgccctacgaagcagtaaataaacagatctgtgagttcttcaaaaagctg
gacattatggaagaccgcatttacattgcttatggacccactggccgagctacaggtgag
ggctttgtccagttgaaaaatgaaatggattacaaggttgccctcagctgtcacatgcag
tatatgggaagccgattcatacaagttcaccccatcagtaagaaagctatgtttgaaaag
attgattccattcgtcaaaggatgcagggtgttgataagaaaaacaactctgagtccggc
aagagccctagaaactgtgcacacatctcaaatattccatataatgtgtcaaagaaagat
gtccgtctgtttctggaaggcattgcagtatttgaagaaagtcttaaagttctggttgac
agcagtggtaacggtctaggtcaggctgtggtgcagttcagggtagaggaggatgcgcta
aatgctgagagactacacaggcagaagttaaatggcagagatgcctttgtgcatttggtc
acctttgagcagatgaaggaaatcgagagaaacccaccaccacaggttaagagaggccag
aaatttgaagggaactctcaaggccaggcacacggccatgctcaggcacagaatcctatt
caagcccaagctcacccctttgccagtataacaggagaagagttcaacttcctcagaaac
actgttggcaatttaggcaatggtccttttgctcaatttactgtcccaggtaatggaata
gtgggccctcctcctctacccccattttcagcaagtctagagaatgtagcccttagcatt
cccccacccatggttgctggtcacttgcctggagcagttctggcacccccaagcttccga
ccaggtagcaacaatggcccacctggctttggaccagagggcatgagggacaggccacct
tttgacaacggctctagaaagagcggaggccataacaaccgaggaagtggccaagggcgt
ttagaagtgcgccctcagtctgccttgggccgtggccctggctctgaccctctgagagag
cagtcactcggaggccctggtaacccttgtggaccaaccattgtaaagatccaaaacatg
cctttcaccgtaacagtcgatgagatcctagatttcttttatgggtatcaagtgctgcct
ggttcagtctgtcaacagttcagtgaaaagggcctgcccactggtgaggcaatggttgcc
tttgagtcacacgaggaggcatcatctgctgtcatggatttaaatgataggcctattggg
gctaggaaagtgaagataactctaggataa
DBGET
integrated database retrieval system
