Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370761
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Entry
139370761 CDS
T10872
Name
(RefSeq) syntaxin-18-like
KO
K08492
syntaxin 18
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
ocla04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139370761
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139370761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139370761
Membrane trafficking [BR:
ocla04131
]
SNARE
Syntaxin (Qa)
Stx-rER
139370761
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
DUF7165
DUF6331
DUF4559
Motif
Other DBs
NCBI-GeneID:
139370761
NCBI-ProteinID:
XP_070966554
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Position
17:37581101..37603667
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AA seq
332 aa
AA seq
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MAVDITVLFKASVKTVKTRNKAIGVGFDLPKDEIFKKSRPKHGFSLKAKEVISNITKLKD
FLLQHRKDYVNAGSLISSDLTRMTDNERDQIDQDAQIFMRTCSEAIKQLRSEAEKQVIPT
QIREHRGAVLDLIEIYLRGVCKLYSEQRAIRVKRVVDKKRLSRLEPEHHHSRVAVERSSP
AEQHSEEKTAKEESSSGGERSVTEVPENNVSLWEEGQGRVEDELSPEEMQMFEQENQRLV
SEMSNLVDEVRQIEGKVVEISRLQEIFAEKVLMQETDIDSIHQLVVGATENVKEGNEDIR
EAIKNNAGFRVWILFFLVMCSFSLLFLDWYDS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatataactgtactgttcaaagccagtgtcaaaacggtaaaaacacgaaat
aaagctatcggagtagggtttgatttgcctaaagatgaaatattcaagaagagcagaccc
aaacatggattttctctcaaggcgaaggaagtgatctccaacatcaccaagctgaaagac
tttctgctgcagcacaggaaggactatgtgaatgctggaagtctcatctcgtcagaccta
acccggatgacagacaatgagcgagaccagatcgaccaggacgcccagatcttcatgaga
acctgctctgaggccatcaagcagctccgctctgaagccgagaagcaggtcataccgaca
cagatcagagagcacaggggggcggtcctcgacctcatcgagatatatttgagaggagta
tgcaagctttactccgagcagagggctataagagtgaagagagtggtggacaagaagaga
ctgtccagactagagccagagcaccaccacagtagggtggcggtagagagaagctcaccg
gcggagcagcacagcgaggagaaaacagctaaggaggagagcagcagcggtggtgagcgg
agcgtgacggaggtaccggagaacaacgtgagcctgtgggaggagggccagggccgtgtg
gaggacgagctctcgcctgaggagatgcagatgtttgaacaagagaaccagaggctggtg
agtgagatgagcaacctagtagatgaagtcaggcaaatcgagggcaaggtcgtcgagatc
tcgcgactccaggagatctttgcggagaaggtgctaatgcaagaaactgatatcgacagt
atccatcagctagttgtgggagccactgaaaacgttaaagagggaaacgaggacatccga
gaggccatcaaaaacaatgctggattccgtgtctggatcctcttcttccttgtcatgtgc
tccttctctctgctcttcctggactggtacgacagctaa
DBGET
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