KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370780
Entry
139370780         CDS       T10872                                 
Name
(RefSeq) ubiquitin-associated protein 2a isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    139370780
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     139370780
SSDB
Other DBs
NCBI-GeneID: 139370780
NCBI-ProteinID: XP_070966641
LinkDB
Position
17:38492540..38528267
AA seq 1218 aa
MMTSLGGDKARGTRDKALPAATHATQPQKQLQATAEQIRLAQMIYDKNDAEFEDKVNQLM
EVTGKIQDECMVALHDCNEDVNRAINFLLESTSDTTSWETVGKKKPLAKDGPTEGKENRE
KRGGEREGSRGRGGSNRRGRGASNRSRQVERVRPEENGVEAVPGPLDRVSERGRRGGRGG
RGECQLVALSHMFQSTLPVGSGGRGRGRAPAGSRFSAQGMGTFNPADYTPEQGTGTTQGD
AWESGANKSNSTDGTVAWRSTLEDWAAEDWSEEMSLSETKVFTASSAPAPQNHLTPGQSL
DLPSLLQKPVGEGRGGGGDSPSTQSLVFTNSHHHPPRNGSAIGTGSTSYAHAALSSVLGA
GFGDLGQSKRSQSSPGAQILEQLKGPGLGPLPSSQAAPPPSTQGASNTSLGSRLPGLGGT
APVLPPPSTSSWDIKVPEPSATSSSHTSHFSRDFKLQPEPSLVLSQLAQRHGAPSLPIAR
QPSPAQSPSPIQGTPLATIGAKPAHSAGPDTQGSNSLQQHRVPQLKAQKRRIPPTSKIPS
SAVEMPGSADVPGLNVQFGALDFGSEAALPDFGPVETCVTGGSRESTPAPQSQTSLYSNP
LSESMSTPLSVPLPLSSSEPVYHSPSVPMPSLTPSSMGTVSSSTPSSSISSSVPSSSSTS
PFVSVGSGYDCGPVAPHSHLAFSQSKEAPGPIMNGLNGVRTSAMDPSSASSTPKPESPSL
SISTSSAPAPSALMPSSIPSHSSALLSLPHDMPSASLAPLSSHGSSSHSSLTYTSVDSSV
SSLAPSSGSYSSAQAPAQSLHQVNSGMAHIMGTMSHMNSMVSSMGGSGHHASQALGLSAN
GTTAQANLSSAPRTAPLLSSSTGKAPPNLSQGVPPLLPNQYIMGPGGLLPAYPQIYGYED
LHMLQSRLPMPSLQDYYGITFPGPAALSGRDGSLANNPYSGEVTKFGRGDSTSPAPSSLS
AQQQPQQGQSQGQNQAQPQPPQPQPQGQPQGHHNSQQQQAFLPPGYSYTGLPYYPGMPGA
AFQYGHTMFMPQGQGPAKQHGVGLGNPSASPFQQQQPSGYGQHTFSSGYEDLTQGQAGVD
YSKGYSNSSQSQAKSATTGPGKGGISVTSGNSGVPEISGSVYNKTQSFDKQGFHAGTPPP
FNLPSAMGGPGGAPGGYAPAPFLHILQPAHQQPHSQMLHHHLAQDGQGGPSQRGQSSSMQ
QKSQVNKSSYGSSPYWGN
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgatgacatcgttgggcggtgacaaagcccggggcactcgggacaaagcgctgcctgct
gccacacacgcaactcaaccacagaaacagctccaggcgactgcagagcagatccgactc
gcccagatgatctatgacaagaatgatgctgagtttgaggacaaagtgaaccagctgatg
gaggtgacaggaaagatccaggatgaatgcatggtagcgctccacgactgcaacgaggat
gtcaacagagccatcaacttcctccttgagagcacctctgatacgacctcatgggagaca
gttgggaagaagaaacccctagcgaaggacggcccgacggagggcaaggagaaccgggag
aagagaggaggagagcgagagggcagcaggggccgcggagggagcaatcggagaggcagg
ggggccagcaaccgcagccgccaggttgagagagtgcggccagaggaaaatggtgtggag
gcggtccctggccctttggacagagtgtcagagcgaggtcgcagggggggaagagggggt
agaggtgagtgtcaattagtggcactttctcatatgttccagtcaacactcccagtcgga
tctggaggcagaggaaggggcagggcaccagcgggtagcaggttctcagcccagggaatg
gggacctttaacccagcagactacaccccagaacaggggacagggaccacacaaggtgac
gcttgggagtcaggggccaacaaaagcaacagcacagacgggacagtggcctggaggagt
actctggaagactgggcggctgaggactggagcgaagagatgagtctctccgagaccaaa
gtgttcaccgcctcaagtgcacctgcacctcagaaccacctcacacctgggcaaagtctg
gacctgccctctctgctgcagaagccagtgggagaaggaagaggaggaggaggggattcc
ccctctacacagagcctggttttcaccaactcccaccatcaccccccccgcaacgggtcg
gccattggcacaggcagcaccagctatgcacacgccgccctgtcgtcagtgctaggggca
ggtttcggggacctgggccagtctaagaggagtcagtccagtccgggggcccagatcttg
gagcagctaaagggcccgggcctgggtcctctcccatcctcccaggcagccccccctccc
agcactcagggggccagtaacacctctctggggagtagactcccagggctaggaggaacc
gcccctgttctcccaccgccttccacttcaagctgggatatcaaggtcccagagcccagc
gccacatcctcctcacacacctcccacttcagccgggactttaagctgcagcctgagcca
tccctggtgctgagccagctggcccagagacacggcgccccctctctgcccattgctcgc
cagccaagcccagcccaatctccctcccccatccagggaacccccctggccaccatcggt
gccaagcctgcccacagcgccgggccggacactcaaggcagcaactcgctgcagcagcac
cgcgttccacagctaaaggcccagaaacgaaggatacctcccacctctaagatcccctcg
tcggcggtggaaatgcctggctctgccgacgtccccggtcttaacgttcagttcggagca
ctggactttggctcggaggcagccctgccagactttggccccgtggagacgtgtgtcacc
gggggctccagggagtccaccccggccccacagagccagaccagcctctattccaatccc
ctcagtgaatctatgagcacccctctttccgtccccctccctctctcatcctctgagcct
gtctaccactccccgtcggtgcccatgcccagcctgaccccctcctctatgggtacagtc
agctcctccactccatcctcctccatctcctcctcggtgccctcctcctcttccacgtct
ccctttgtctcagtggggagcggttatgactgtgggcctgtggcccctcactcacacctg
gccttctcccagagtaaagaggcacccgggccaatcatgaacggtctgaacggtgtgagg
acgtctgctatggacccttcgtcagcctcctctacgccaaagccggagtctccctctctg
agcatcagtaccagcagtgcccctgccccctctgccctcatgccctcctccataccctcc
cacagctcggcactcctcagtctgccacacgacatgccctctgccagcctggcaccgctc
agcagccatggcagcagtagtcattcctctctcacttataccagtgtagacagtagtgtg
agctctctggcaccctcgtctggctcctactcctctgcccaggccccagcccagtcactc
caccaggtcaacagcggcatggctcacatcatgggcaccatgagccacatgaacagcatg
gtcagtagcatgggtggcagcgggcatcacgccagccaagcactggggctcagtgccaat
gggaccacggcccaagcgaacctctcctcggcccccaggaccgcaccgctgctctcctcc
tcaactggtaaagctcctcctaacctgtctcagggggttcccccactactgcccaaccag
tacatcatgggcccaggaggcctgctgcctgcctacccgcagatctacggctatgaggac
ctccacatgctacagtccagactgcctatgccctctttgcaggattactacggaatcaca
ttccctggtcctgcagcactctctggcagagatgggagcctcgccaataacccctactca
ggtgaagtcacaaagtttggcaggggtgactccacctcccctgcgcctagcagcttgtcg
gcccaacagcagccccaacagggccagagccaagggcagaaccaggcccagccacaaccc
ccccagccccagcctcaaggccaaccccagggccaccacaacagccagcagcagcaggcc
ttcctcccgccaggctacagctacacaggcctgccctactaccccgggatgcctggcgct
gccttccagtacggccacaccatgttcatgccccagggacaggggccagccaagcagcac
ggtgtgggtttgggaaacccctcagccagccccttccagcagcagcagcccagcggctac
ggccagcacaccttcagctcagggtatgaggacctgacccagggccaagcaggagtagac
tatagcaagggctatagcaactcctcccagagccaggccaaatctgctactacaggcccc
ggtaaaggcggcatctctgtgacatcaggcaactccggggtcccagaaatcagtggaagt
gtttacaacaagacccagtcctttgataagcagggtttccatgcggggactccccctcct
ttcaacctgccttcggctatggggggtcctggaggggccccgggtggctacgctcccgcc
cccttcctccacatcctgcagcctgcccaccagcaaccccactcccagatgctgcaccat
catctggcccaggacggacagggaggtcctagccagcgaggccagtctagcagcatgcag
cagaagagccaggtcaacaagtccagctacggcagctccccatactggggcaactga

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