Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370785
Help
Entry
139370785 CDS
T10872
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139370785
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139370785
04261 Adrenergic signaling in cardiomyocytes
139370785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139370785
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139370785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
Cache_3-Cache_2
VWA_CoxE
PsbU
Motif
Other DBs
NCBI-GeneID:
139370785
NCBI-ProteinID:
XP_070966647
LinkDB
All DBs
Position
17:complement(38717412..38803792)
Genome browser
AA seq
1097 aa
AA seq
DB search
MAICTPSCSIVCLVSFQIILIFNVQWPGADGLTFPQQYTIMHWARRIEQEIDRVFQHISG
AQQLKGIYNEKRRQFSLVKNSPYEMVEKVASDIEKLLAKKRKALDRLASEAERVQRDHPW
HDSVKEWNMTYYDSKAELDYQYSLQDGDGETVSPPLQVEFVYDPNFKNKVNYSFTAVQIP
TDIYKGAPVILNELNWTQALEKVFMENSQEDPSLLWQAFGSATGVTRYYPATPWRAPDKI
DLYDVRRRPWYIQGASSPKDMIILVDVSGSVSGLTLKLIKSSVMEMLDTLSDDDYVNVAR
FNEKAEAVVPCFKHLVQANVRNKKIFKEAVKLMQAKGTTDYKSGFHFAFNQLLNKTNVPR
AHCNKIIMLFTDGGEDRAQDIFEQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGFY
FEIRSICAIRINTQEYLDVLGRPMVLAGSRAKQVQWTNVYQDALGLGLVFTGTMPVFNLT
VDGNSQNQLILGVMGVDVHLDEIKKLTPRYNLGANGYIYAIDPNGYLLLHPNLHPKLLDL
PEPVTLDFLDAEVEDSSKQEIRKHMIDGRPGDMQIKTLVKSIDERYIDEGVRSYTWTPIN
GTDYSLGLVLPPYGEYYIQADLSDVMLQLQYLQSLLPSSFESGGHVFLAPREYCKRLHIS
DNNTQFLENFLSLMVEITPESEDCDQGLIHNLILDSGIIWQLASRVWKNKDIQTYGFLAL
FAATDGGVTRVFPNSAAESWDEDPEPFNSNYYRRSLDNKGYMFRAPPRASMDDPVTSENG
TIGILVSTAVEVNLGGKNLKPAVVGVKLDLEAWVDKFKILASNVSDSRQGSQKCGPSRSC
EMDCEVNTDDLLCYLIDDGGFLVMSNQRDHWKKVGLFFGDVDPYLMHALYNNSIYARRQS
FQYQSACEPVSSSHTGAAPRGIFVPSIADMLSLAWWTSAAAWSVVQQLLYGLAYNSWLYT
GDVLADGFDQKESSCVTIQSQFYFTNTTNSYNVLQDCGNCSRLFHAKRIENTNLLFVVAE
TLPCSSCEIERLTQVKTEFQEEDPCEVLNSARYRRGPTECWDYNIWENTSECGRGHSLQS
SIGILFSIQLILTLLSL
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgatatgcactccgtcttgcagcattgtctgcttggtatctttccagattatcttg
attttcaatgtacagtggcctggcgccgatggtctcacgttcccccagcaatacacaata
atgcactgggccaggcgcattgagcaggagatcgacagagtcttccagcacatcagcgga
gcccagcagctaaaagggatctacaatgagaaaagaaggcagttcagcctggtaaagaat
tctccttatgagatggtggagaaggtagcatcagacatcgagaagctactggccaagaaa
cgcaaagcacttgataggctggccagtgaagcagaacgtgtccagcgagaccatccctgg
cacgacagcgtcaaggagtggaacatgacgtattacgattccaaggcagagctagactat
cagtactccctgcaagatggtgatggggaaacagtgagccctccactacaggtggagttt
gtgtatgaccctaacttcaaaaataaggtcaactactccttcacagccgttcagatcccc
acagacatctacaaaggagccccagtgattctaaatgagctgaactggacccaggcgctg
gagaaggtgtttatggagaacagtcaagaggatccttcactactctggcaggcatttggt
agcgccactggggtcactcgctactacccagccacaccgtggagggcccctgataagatc
gacctttatgatgtgaggagaaggccatggtacatccaaggggcttcatcccccaaagac
atgatcatactcgttgatgtgagtggcagtgtgagcggcctcactttgaagctgatcaag
tcatcagtgatggagatgctggacactctgtctgatgacgactatgtcaacgtggccagg
tttaatgaaaaggcagaggcagtggtcccttgcttcaaacacctggtccaggccaacgtt
cgcaacaagaagatcttcaaagaggctgtaaagctcatgcaagctaaaggcaccacagac
tacaagtctggtttccactttgccttcaatcagctactaaacaagacgaatgtcccgcga
gctcactgcaataaaataatcatgctgttcactgatggaggagaggatcgagctcaggac
atctttgagcagtacaattggcccaacaaaacggtgcgggtctttacattctctgtgggg
cagcacaactatgatgtcacacccttgcaatggattgcgtgtgccaataaaggtttctat
tttgagatccgctccatctgtgccataaggattaacacccaggagtacctggatgtgctg
ggccgccccatggtcctggcaggcagccgtgccaagcaggttcagtggaccaatgtttat
caggatgccttgggtctgggacttgtttttactgggaccatgcctgtttttaatctcacc
gtggatggaaactcacagaatcagctcattttaggtgtcatgggggtggacgtgcatctg
gacgaaatcaaaaagctgacgccccgatacaaccttggagccaatgggtacatatacgcc
atcgacccaaatggataccttctcctgcatccaaaccttcacccaaagctgctcgaccta
ccagagcctgtaacacttgacttcctggatgctgaggtggaggacagttccaaacaggaa
atccgcaaacatatgattgatggcagaccgggtgacatgcagattaagacgcttgtaaaa
tcaattgatgagcgatacatagatgagggagttcggagttacacctggacacccatcaat
ggtacagactacagtctgggcctggtactgccgccctacggtgaatactacatccaggca
gacctgagtgatgtgatgctgcagctccagtatctgcaatctttgctgcccagctccttt
gaatcagggggacacgtgttcctggctcccagggaatactgcaagcgtctgcacatctct
gacaacaacacacagttcctagagaacttcctatctctcatggtggagatcacaccagaa
tctgaagactgtgatcaaggcctcattcacaatctgatcttggattctggaatcatctgg
cagctagcatctagagtgtggaagaacaaggatatccaaacgtatggtttcctggcatta
tttgcagccacagatggaggtgtaacccgggtcttccccaactcggctgctgagtcgtgg
gatgaggaccctgagcccttcaactctaactactaccgccgcagccttgacaacaagggc
tatatgttcagagctccacccagagcctccatggatgatccggtgacctctgagaacggc
accatcggaatcctggtcagcactgccgtggaagtcaacctgggaggcaagaacctgaaa
ccggcagtggtgggggtgaagctagacttggaagcctgggtagacaagttcaagatcttg
gccagcaatgtgtctgacagtcgtcagggctcgcaaaagtgtgggccatccagaagttgt
gagatggactgcgaagtcaacactgatgacttactctgctatctgattgacgatggtggc
ttcctggtgatgtccaaccagagggatcactggaaaaaggtgggccttttctttggtgat
gtggacccctatcttatgcacgcgctgtataacaactccatctatgcccgccggcagtct
tttcagtaccagtcagcatgtgagccagtcagcagcagccacacaggggcagcacccagg
ggcatctttgtgccctccatcgcagacatgctcagtctggcctggtggacatcggcggca
gcatggtctgtagtccagcagctgctctatggattggcctacaacagttggctctacaca
ggtgatgttctggcagatgggtttgaccagaaggagagcagctgtgtgaccatccaaagc
cagttctacttcaccaacaccaccaactcatacaatgtgctgcaggactgtgggaactgc
tccaggttatttcatgctaagaggatagagaacaccaacctgttgtttgtggtggctgag
acactgccctgtagctcctgtgagattgagagactgacccaggtcaaaacggagttccag
gaggaggatccctgtgaggtgttgaactctgcacgctaccggagaggcccgaccgaatgc
tgggactacaacatctgggagaacacatcggagtgtgggagaggccattccctacaatct
tcaataggaatccttttctctatccagctgatcctgactcttctctctctctga
DBGET
integrated database retrieval system
