KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370816
Entry
139370816         CDS       T10872                                 
Name
(RefSeq) laminin subunit beta-3-like
  KO
K06244  laminin, beta 3
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04382  Cornified envelope formation
ocla04510  Focal adhesion
ocla04512  ECM-receptor interaction
ocla04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    139370816
   04518 Integrin signaling
    139370816
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    139370816
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    139370816
SSDB
Motif
Pfam: Laminin_N EGF_laminin EGF_LMN_ATRN LAMB1 GldM_1st hEGF KASH_CCD GEMI5_RBS DUF8567 DUF745 CEP135_TSGA10_CC CCDC39 F5_F8_type_C
Other DBs
NCBI-GeneID: 139370816
NCBI-ProteinID: XP_070966699
LinkDB
Position
17:40527484..40557836
AA seq 1152 aa
MWILFHLAALTAVAVTQRDCSRGACYPPMGDLLLGREHQLHASSTCGLTGSEVFCTYFGQ
WRMKCCTCDSRNPSSQLAHTIQNVLSTAGPNRWWQARKDVSPVTLQLDLKNMFQLDTIIL
TFKGPRPSALVVERTLDNGQTWQPSLYMASDCRSAFPGIAMTMPRSLDQTYCYTLPPVPA
NSYQDQTIQFSPLGQFSSISVPNGQKIQEVSGLTGLRVKLTELGAVPRLPGRTPSLFYAL
GEMRVMGTCLCHGHANRCLQDTTAYQMPSTQVSAQCECQHNTAGVNCEKCADLYNDLPWR
SAEEGNTHTCKRCECNNHAQRCRFDPSVYEASGWRSGGVCEGCLHHTTGPKCDRCAPGYQ
LNHRSSIDQPDACTRCHCSAEGAENGGRCDDVTGSCRCKMGYYGLTASNLLGCTKCFCSA
EGSLSSVCDPVSGQCPCRPYHQGLTCELCSRGYWNPSSPHGCEPCRCDPTNSHGDTCDRS
TGQCQCRSGFGGRTCTECPDNTYGDPLIGCRLCQCAAGGMVPGGCDKRTGACRCRIGVIG
TRCDACSRGHVYSFPDCEVCPSCFFSLDSYIQNLTLGLERLSARIPSRPGGSLPTGLGLR
IQALEATLIQIRDSLPLPSPSMRQVNDALFQLRRLRDQLDQVDGDLSPQGRGLELGSQLD
ELQALLGGLGLLYNSKRDALRNPINSNNAGAFSSIKNAYDESTDAAKSVDASGKTVDQSS
AVREDALDLQNQVQPENTRDLEKLNQQLNTKPDLSPTAKQVCGSVRSAPCTPAQCDGELC
PAEGAPPCGRGESCVGALPLGTRAVRDAEEVKDRLQQLNGKITQAAAQIQKTQDTVNLVR
QSTDDLVNQMRRARDDLEADLQETRYFVKELKDFLSDPSSDPTDISTVSEWILNAKLPLS
LAALKRKLQEIRALAAGLPDSKAVLDQAGPQLDTARRLLQEAQDARDAGLGVKDDVDGWL
EGFTAVDGSLSGLNDKVQDSLDIVEDISNSLAQTKAQLTPAVKALGEVSALAEGMKPQLE
GLKALVRSGGLLAQNAEGEANNANKEADAATRDLASLEKQLEQLRAAERTSGHGDGTGTT
GERLRKLQEEAGSLAQDTGDIMKALAGKADSLRRLQDEVLLKSQRLTGLDGKLRDLLADM
RQKVKILSTCQG
NT seq 3459 nt   +upstreamnt  +downstreamnt
atgtggattttattccacttagcagccctgacagcagtggctgtgacccagagggactgt
tctcggggggcctgttacccccctatgggagacctgctcctcggtagggaacatcagctt
catgcctcctccacctgcggtcttaccggctctgaggtgttttgcacctactttggacag
tggaggatgaagtgctgtacctgtgactccaggaacccatccagtcagttggctcacacc
atccagaacgttctatccaccgctggacccaacaggtggtggcaggccaggaaagacgtg
agtccggtcaccctacagttggacctaaagaacatgtttcagctggacaccatcattctg
accttcaagggtccccgtcctagtgcgctggtggtggagaggacgttggataatggtcaa
acctggcaaccgtcactctacatggcctcagactgtcgctcggccttccctggcattgcc
atgactatgccacgctctctggaccagacctactgctacaccctaccccccgtccctgct
aactcttaccaggaccagaccattcagttcagccccttgggccagttctctagcatcagc
gtccccaatgggcagaagattcaagaggtgtcaggattgacaggcctgcgggtgaagttg
actgagctgggtgctgtgccccgcttgcccggccgcaccccctctctgttttatgccctc
ggagagatgagagtgatgggcacctgcctctgccacggccatgccaaccgctgtctgcag
gatactactgcctaccagatgcctagcacacaggttagtgctcagtgtgagtgtcagcac
aacacagcaggtgtaaactgtgagaaatgtgctgatctctacaacgacctgccctggaga
tctgcagaggagggaaacacacacacctgcaaacgttgtgagtgtaacaaccacgcccag
cggtgccgtttcgacccatctgtgtatgaggcgagcggatggaggagtgggggagtgtgt
gagggctgtctgcaccacacaaccgggcccaaatgtgaccgctgtgcccctggataccaa
ctcaaccaccggagcagcatagaccagcctgatgcctgcacacgctgccattgcagtgca
gagggggcggagaatgggggtcggtgtgatgatgtcacagggtcgtgtcgctgcaagatg
ggatactatggcctgactgcctccaaccttctgggctgcacgaagtgcttctgcagtgca
gagggctccctgtccagtgtgtgtgaccctgtgagcggtcagtgtccctgtcgaccttac
caccaggggctgacttgtgaactctgttcccgtggttactggaacccctcctccccccac
ggctgtgagccttgtcgctgtgaccccaccaactcccatggtgacacctgcgaccggagt
acgggtcagtgtcagtgcaggtcagggttcggaggtcgtacctgtacagaatgccctgac
aacacttacggagaccccctcattggctgcagactgtgtcagtgtgctgctggaggcatg
gtaccaggaggctgtgataagcgtacaggggcctgccggtgccgtattggtgtcataggt
actcgttgcgatgcctgtagccgtggccatgtttactcctttcccgactgtgaagtctgc
ccctcctgcttcttctctctggactcctacatccagaacctcaccctgggcctagagaga
ctctccgccagaatcccctctcgtcctggtggctcgttgcccaccggtctgggtctccgc
atccaggccttggaggccactctcatccagatacgtgactctctcccactcccatctccc
tctatgagacaagtcaacgacgccctctttcagctacgcagactaagggaccagttagat
caggtggatggggatctgtcaccccaaggcagaggcctcgagctgggctcacagctggac
gagttgcaggctctcctgggcggtctgggtttgctgtacaactccaagagagatgctcta
aggaaccctatcaactccaacaatgcaggggccttctcttctataaagaatgcctatgat
gagtccacggatgcggcaaagagtgtggatgctagtgggaagactgtagatcaatcttca
gcggtcagagaggacgctcttgacctccagaaccaggttcaaccagaaaacaccagagac
ctggagaaactcaaccagcagctgaacaccaaacctgacctctcacccactgccaaacag
gtgtgtggcagtgtgcgctctgccccttgtacccctgcccagtgtgatggtgagctgtgc
cctgcggagggggcgccaccctgtggtcgtggcgagagttgcgttggggctctgcctttg
gggacccgagctgtgagggatgctgaggaggtaaaggacagactgcagcagctcaatggg
aagatcacacaggctgctgcacagatccagaaaacacaggacacggtcaatctggtcaga
cagtccacggacgatctggtcaatcagatgaggcgggccagggatgacttggaggcagat
ctgcaggagacaagatactttgttaaagagctgaaggacttcctgtcagacccgtcatca
gacccgacagacatcagcacggtgagtgagtggatcttgaacgccaagctgcctctcagt
ctggcagctctgaagaggaagcttcaggagatcagagccctggcggcaggactcccagac
agcaaagcagtcctggaccaggctggaccacagctcgacactgcccggcgcctgctacag
gaggcccaggacgccagggacgctgggctaggtgtgaaggatgatgttgacgggtggctg
gagggcttcacagccgtggacggctccctctctggcctgaacgacaaagtgcaggacagc
ttggacatagtggaagacatcagcaacagtctcgcacagaccaaggcccagttgactccc
gcggtgaaggctctaggggaggtgtctgccctggctgagggaatgaaacctcagctggag
gggctcaaggcgctggtgcgctctggaggtctgctggcccagaatgctgagggagaggcc
aataacgctaacaaggaggcagatgctgcgaccagggacctggcgtccctggagaagcag
ctggagcagctgcgtgctgcagagaggaccagtggtcatggcgatgggacggggacgaca
ggtgagcgtctccggaagctgcaggaggaggctggttctctggcccaggacactggagac
ataatgaaggcactagcaggtaaagcagactctctgcgtagactacaggatgaggtccta
ctgaagtcccagaggctgactggtctggacggcaaactgcgggacctcctggctgacatg
agacagaaggtcaagatcctctccacctgccagggctga

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