Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370836
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Entry
139370836 CDS
T10872
Name
(RefSeq) WD repeat-containing protein 82-like
KO
K14962
COMPASS component SWD2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
139370836
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
139370836
COMPASS/SET1 complex (yeast)
139370836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139370836
NCBI-ProteinID:
XP_070966748
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Position
17:40209297..40218572
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AA seq
314 aa
AA seq
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MKITDSVLRSFRVARTFRENSQKVNCVDYSSNGESAISSSDDDSIVLYDCQEGKPIRTLY
SKKYGVDLIRYTHGDANTVVYSSNKLDDTIRYLSLTDNKYIRYFPGHTDRVVALSMSPVD
DTFISGSLDMTIRLWDLRSPNCQGLTNPLGKPVCSYDPEGLIFAAGVDSEAIKLYDLRSF
DKGPFASFETLFSRVCEWTGLKFSRDGKQILISTNGGAIRILDAFNGSVLHTFSGYNNSK
GISLEACFTPDSDFVMIGSEDGRVHVWSTESGMKIAVLDGKHSGPINTLQFNPKYMTFAS
ACSNMAFWLPCVGD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaagattacggacagcgtgttgcgaagttttagggttgctaggacattccgggagaat
tcgcagaaagtcaactgtgtggactacagctcgaacggcgagagtgcaatatctagtagc
gacgacgactccattgttttatatgactgtcaggagggaaaaccaatacggaccctgtac
agtaagaagtacggagtagacctaatccggtatacacatggggatgccaacacagtggtc
tacagctccaacaaactagatgataccatccgatacctgtctctcactgacaacaagtac
attcgctacttccctgggcacactgatagggttgttgctctctccatgtcaccggtggat
gacacatttatctctggttccttggatatgaccatacgactctgggacctgcgctctcca
aactgtcagggtcttactaatcctttggggaagcctgtttgctcctatgaccccgagggc
ctgatattcgctgctggggtcgattctgaggcgattaaactgtacgacctccgctccttt
gacaagggcccattcgcctcctttgagactctgtttagccgtgtctgtgagtggactgga
ctgaagttcagtagggacgggaagcagattctcatctctaccaacgggggtgctattcgg
atcctagatgccttcaatggatccgtgctgcacactttctcaggctacaacaacagtaaa
ggcatttcattggaggcctgcttcaccccagactcagactttgtcatgattggttcagag
gatgggagggtccatgtgtggagtacagagagtgggatgaaaatagctgttctggacggg
aagcattcaggaccaatcaacacactgcagtttaaccctaaatacatgacgtttgccagc
gcctgctccaatatggcgttctggcttccctgtgtaggagactga
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