Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370865
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Entry
139370865 CDS
T10872
Name
(RefSeq) uncharacterized protein isoform X1
KO
K05453
macrophage colony-stimulating factor 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139370865
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139370865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139370865
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
CSF and other factors
139370865
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
Motif
Other DBs
NCBI-GeneID:
139370865
NCBI-ProteinID:
XP_070966787
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All DBs
Position
17:41556186..41598493
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AA seq
612 aa
AA seq
DB search
MSPTLEPGHFGLQVSFQDFLLAVTTDGLLIARHLCFLFLMCFPLAWGGVPGPCRHSVTKG
HLLNLNCLIDNQLENGWSITYVFTERQSLSEVCYIKAAFPQILELLNTHFKYVRKSDNGR
YVKLLKKVIYDLYSQNCIPEINEEIEDTPLKFVRMHSTSPREALTKARGVIEMYMTLMTK
SNGPVDWNCEEEYAEDYQESTTALPTPTAAEPEPERQCTCPTVGPVTPDVSLVSHSVWSS
PPQPTLSQLTSIVPPRPTHPSLGTKGAEPQVFLVSSGTVRPPFPRELQRTVPDGRSLGGG
REGDIHWDFRPPSPNGTESDSGLYQAVANTPSATNEPSPSSPPSLVLLGTVGSHDETFYY
PQTERVRETSTARPAGRGAAGSPHSHFAVAGAKLVTPVPFLYKLIGIPPSSDESTAYVLA
KRSLDARNYGILQDWVSTETPQLEDTREKYPGTERYLHDWNPPIESTTTEASPRLKMTVE
EPDKLHTTTEAHDQVTKTEPNHPRTSYKEVFTTDILSERTAADNAPISERSSEGSVKEFR
HGKTGHSDLSISYQTAFIIAAVCSGPILIITLFCLSEKKRLQALLHSTSIIENQRACSSI
EDIELQYCKAKD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctactctggaacctgggcattttgggttacaggtatcattccaagattttttg
ttagcggtaacaactgatgggctgctaatagctaggcatctgtgcttcctcttcctcatg
tgcttccctttggcgtggggtggcgtccctggtccatgtcggcactctgtgaccaagggt
cacctcctcaacctcaactgcctgattgataatcagttggagaatggctggtcaataacc
tacgtattcactgagcgccagagtttgagtgaagtctgttacatcaaagcagcatttcca
caaatcctggagcttctgaacacacacttcaagtatgtcaggaaatcggacaacgggcgc
tatgtcaaactcctgaaaaaggtcatatatgacctctactcccaaaactgcatacctgaa
attaatgaggagattgaggacaccccattgaagtttgtcagaatgcacagcacctcgccc
agagaggctctgacgaaagcccggggggtcattgagatgtacatgaccctgatgaccaag
agcaacgggcccgtcgactggaactgtgaggaagagtatgcagaggattaccaagaatcc
accactgccctccccacccccaccgcagctgaacctgaacctgaacgccagtgtacatgt
ccgacagtgggtccggtaacccctgatgtctccctggtgtcccacagcgtatggagcagt
cccccacagcccaccctctcccaactcacctcgattgtgcctcccaggccgactcatcca
tccctgggtaccaagggcgctgagccccaggtgttcctggtgagttctggtaccgtaaga
ccccccttccccagggagctgcagcggactgtccccgatggacgttcacttggagggggc
agagagggggatatacactgggactttcgtccaccttcacccaatggaactgagtcagat
tcgggactctaccaggcagttgctaacaccccgtctgccacgaatgaaccttccccgtct
tcccctcctagtctggttcttctggggaccgttggctcccatgacgagacattttactac
ccccagactgagagggtaagggagacttccacagcccgaccagcagggagaggagcagca
ggctcaccccacagtcacttcgctgttgctggggccaagctggtcacaccagtccctttc
ctttacaagttgattggcatcccccccagtagtgatgagagcactgcctatgtgttggcc
aagaggtcgctggatgccagaaattatggaatacttcaggattgggtttcaacagagacc
cctcaactagaggacactagagaaaaatacccaggcacagagagatatttacatgactgg
aaccctccgattgaaagcactacgaccgaagcatctccacgtttgaagatgacagtggag
gagccagacaaactacacaccactacagaggcacacgaccaagtcacgaagactgagcca
aaccatcctaggacatcctataaggaagtattcaccacagatatcctgtcagagaggaca
gctgcagacaatgctcctatttcagaaaggtccagtgaaggctcagtgaaggaattccgg
cacgggaaaactggtcattccgatttaagcatctcctaccagacagcctttatcattgca
gcagtgtgcagcggaccaatcctgatcattaccctattctgtctcagtgagaagaagaga
ctccaagcccttctccacagtaccagcataattgaaaaccagagggcatgcagcagcatt
gaggacattgagctacaatattgtaaagccaaggattga
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