Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370875
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Entry
139370875 CDS
T10872
Name
(RefSeq) zinc finger CCCH domain-containing protein 11A isoform X1
KO
K22415
zinc finger CCCH domain-containing protein 11
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139370875
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GFIT
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NCBI-GeneID:
139370875
NCBI-ProteinID:
XP_070966827
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Position
17:42287273..42310248
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AA seq
919 aa
AA seq
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MTNHGDDCYFFYYSNCAKGDSCPFRHCEAAMGSEVVCSLWQESRCFRQVCKFRHMEIKKN
RKEIACYWENQPAGCQKPHCAFHHEKPRLIDGQYVPPNKSSALKEEEEPHEDSLPPVPIP
SPANPQLRGVIKAETQENVPSPTHPPVVINPADDEDEDEDDQLSEGEDSRSGSDGSRVVS
PRKMAVGSTSDDSLDFGVRTLEEIRLRKALKASMRRAGYPVPGQGSDQRNNGASGEKENM
RSFIRPSLFTAKDDTVVFGEETVRRNVADRLGKRIIVKEVPAGSDLPMKRCLAERLGRKM
DEGETDLPPQKALKPVRDRLGLPVEPTTASESAESNSENTAPEIIRIKTLEEIRGEKLAK
SQGQALGDHPLPSTPDTTSTSKAPKRGTTGKPAVSLHVKTFSEILHAKRKLEEDQQQGPS
LRKAMQEAMEASPGNSQAQGPIEPAMPSRGAPPGGGVKVKTLDEIRREKAAKMQARGQGV
SNRKIPGSASGEGGTKKPLGLRINKAASSAASTTTQKTSEVTEKRESSVATEASPANGRS
DAVSGDSVKVKTFEEIMREKRLRRQQLQEEQASSPSQPEGSAEADSFPKQATGPALQREK
RVCVSTPAASSPPSITLEAPAQAPKAPVRQRITLKPKAASPLPCVTSPKQGSPLRQAEAD
SPSLSPRSSSTAPGKRKRGSPGGASPPKQAAAAAASPGPSVKGSPVEKAQDGAQKKSPGQ
ATEAKVRPKLNVRPSVMKLAAQVKPGQKRTSARSAVAAVKPLNSTYAVQEEPLQELPCKR
REVSSTSSSVKVQISPVVSRRPPTIPGPGLSSSPLREEFQAVPVNQHSPAITTAAPETCI
VPQSSVVNTPIQPKPRRPSVAMSRSAATAPSASSSTSAMDEFDELMNEFTDDRLDDDLEL
DPGKGEDDYLLELSEMIDS
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgactaaccatggagatgactgctatttcttttactactccaactgcgctaagggtgac
agttgccccttcagacactgtgaagccgcaatgggcagtgaggtcgtttgcagcctgtgg
caggagagccgctgtttccgacaggtctgcaagttccgccacatggagatcaagaaaaac
aggaaggagattgcttgttactgggagaaccagcctgctggctgccagaagccgcactgt
gccttccaccacgagaaaccacgcttaatagacggccaatacgtaccgcccaacaaaagt
tcggccctgaaagaagaggaggagcctcatgaggattctttgcctcctgtacccatcccc
agcccagccaatccccagctccgtggggtcattaaggctgagactcaggagaatgttccc
agccccactcacccgcctgtggttattaacccggcagatgacgaagatgaggatgaagat
gatcagttgtcagagggggaggacagcaggtctggctcagacggatccagagtggtctct
cccaggaagatggccgtgggctccacctcagatgattcgctggactttggtgtcagaacc
ttggaggagatcagactgaggaaagcgctgaaagccagtatgaggagagctggttatcca
gttcctggccagggctcagatcagcggaacaatggtgccagcggagagaaggagaacatg
agatccttcatccggccatctctctttacagccaaggatgacactgtggtctttggtgaa
gagaccgtgagacgcaatgttgcggacaggcttgggaagagaataatagtcaaagaagtt
cctgccgggagtgacctgccaatgaaacgctgtctggccgagcgcctcgggaggaaaatg
gacgagggtgaaacggacctgccgcctcagaaagctctgaaacctgtcagggatagattg
ggattacctgttgaacccactactgcctctgaatcagctgagagcaacagtgagaataca
gcaccggaaataatccgcatcaaaaccctggaggaaatcaggggggagaagttggctaag
tcccaaggacaagctctgggggaccaccctctcccttcaactcctgataccaccagtacc
agcaaggccccaaagagaggcaccactggcaaacctgcagtcagcctccacgtgaagacc
ttctctgagatcctccacgccaagagaaagctggaggaggaccagcagcaaggccccagc
ctcagaaaggccatgcaggaggctatggaagcatctccagggaactcccaggcccaggga
cccattgagccagccatgcccagccggggcgcacctcctggaggtggagttaaggtaaag
accctggatgagatccgcagggagaaggcagccaagatgcaggccaggggacagggggtg
tccaacagaaaaatcccaggctcagcctctggagagggaggcaccaagaagcccctggga
ctgcgcatcaacaaagcagcttcttctgctgccagcactaccacccagaagacatctgag
gtgaccgagaagagggagtcttctgttgctactgaggcgagccctgctaacggtaggagt
gatgctgtgtccggtgacagtgtgaaggtgaagacctttgaggagatcatgcgtgagaaa
aggctccgcaggcaacagctgcaggaagagcaggcctcgtcccccagccaaccagagggc
tctgccgaggcagactctttcccaaaacaggccacaggccccgccctccagcgggagaag
agggtgtgtgtgagcacccctgccgcctcctctcccccctcaatcaccctggaggcacct
gcccaggcacccaaagcccccgttcgccagcgcatcaccctcaaacccaaggctgcctct
cctttgccctgcgtcacctcccccaagcaggggtctccactgaggcaggcagaggcagac
tccccctcactcagccccaggagttccagcactgccccaggcaagaggaagagaggctcc
ccaggcggtgccagtcccccaaagcaggctgccgcagcagcggcctcccctgggccctct
gtgaaaggttctccggttgagaaggctcaggatggagcccagaagaagtccccagggcaa
gctactgaagctaaagtgaggcccaagctgaacgtgaggccttctgttatgaagctggct
gcccaggtgaaaccaggccagaagagaacatctgctagatctgctgtcgctgcagtcaaa
cccctcaatagcacctatgcagtgcaggaggagccactgcaggaactgccctgcaaacgg
agagaggtgtcctctacttcctccagtgtgaaggtgcagataagccctgtggtctcaagg
agaccccccaccatcccgggccctggcctcagctccagccccctgagagaggagttccag
gcagtccctgtcaaccaacacagcccagccatcaccacagcagccccagagacctgcata
gtcccacagagctctgtggtgaatacacccattcagcccaagccccggcggcccagcgtt
gcgatgtctcgctcggccgcaacagccccttccgctagctcctcaacctccgccatggat
gaattcgacgagttgatgaacgagttcacagatgaccgtctggacgatgacttggagctg
gatccaggcaagggagaggatgactacctgctggagctgtctgagatgattgacagctag
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