Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370880
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Entry
139370880 CDS
T10872
Name
(RefSeq) beta-2-syntrophin-like
KO
K24064
beta-syntrophin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139370880
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
139370880
NCBI-ProteinID:
XP_070966838
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Position
2:59365761..59380419
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AA seq
586 aa
AA seq
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MALWTRADKNGQLDLLLRDRWIRVAGELTSETFTLTAEAEISGHANNLHCNNSADLRNGI
SNGNDPGLTSGNSNHGQISNPEQHPNHGALGRSSSPAHGGINRGHYEGFSAGSSKYNRDN
GTNSDFGSPGSSYGSPRSSFSSRHGETSINLESCASEAVRKVRVVKQESGGLGVSIKGGR
ENRMPILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHDLAVQALKKAGKEVTLEV
KYIREVSPLFKKPSLVADLPWDGVRPQSPNFSGSEDSGSPKHSGAKDRKLIPLKMCFISR
NLTIPDLENRLLELHSPDGQHTVVLRCKDSPSANSWFTAIHTNIASLLPQTLAHINSYLG
SITTGSHPQLKHISWLAEQVQLDGGRHQFRPIVMALTEKDILLFESVPWNREAWSTPLLT
HPLLATRLVHSGSARSSPAQGADLVFATRTGTGRGIESHVFRVETHWDLSSWTRALVQGG
HSAAELIKEISIGCMLNRQDVRLTLHYEKGFTVTRESREPAVGTVLFRYPFEKLKMSTDD
GIRNLYLDFGGPEGEMVFDLHSGPKPVVFVLHSFLSAKLSRLGLLT
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggctctctggacacgagcggacaaaaatggtcaattagaccttttgctccgggaccgc
tggattcgggtagcgggcgaattgaccagcgagactttcacattaacggccgaagcagag
ataagcgggcacgcgaacaacttgcattgcaacaattcagcggacctacgaaatggaata
tcaaacggaaacgacccagggttaacttcgggaaattcgaaccatggtcaaatctcgaac
ccagaacaacatccgaaccatggtgcgctaggacgaagcagtagcccagcgcacggggga
atcaacaggggtcactacgaaggttttagcgcaggctctagcaagtataatcgtgataac
ggtacgaactctgattttggcagcccggggtccagttacggtagtcctagatctagcttc
agttccaggcatggcgaaacttccatcaatttagaatcctgcgcatcggaagctgtgcgt
aaagttcgagttgtaaaacaagagtcgggcgggttgggggtcagcatcaaggggggtcgg
gaaaaccgaatgcccatcctaatatccaagatctttcccggacttgcagcagatcagagt
cgagctcttcgggtcggtgacgcgatactgtcagtcaatggaaatgacctcagggaggct
acgcatgatctagcggtgcaggctctaaaaaaggccgggaaagaggttacgcttgaggtg
aaatatatccgggaggtttccccactgtttaagaagccgtccttggtagcagacctaccg
tgggatggggtgcgtcctcaatcccccaacttcagtggcagtgaggactcggggtccccc
aaacacagcggggccaaggaccgaaagctcatccccctcaaaatgtgcttcatcagcagg
aacctgactatacctgacctggagaacaggctcttggaactgcactctcctgatggccag
cacacggtggtgctgcgctgtaaggacagccccagcgccaactcctggttcacagccatc
cacaccaacattgcttccctgctgccccagactttggcccacatcaactcctacctgggc
tccatcaccacggggtcacacccccaactcaaacatatcagctggctggcagaacaggtc
cagttggatggtgggcggcaccagttccgaccaatcgtcatggcactgacagagaaagat
atcctgctgtttgaatcagtcccatggaaccgtgaagcatggtccacacccctgctcaca
cacccactactcgccacaagactggtgcactctggcagtgcccgcagttccccggcgcag
ggggcagacctggtgtttgccactcggacaggtacagggcgaggcattgaatcccatgta
ttccgggtggagacgcactgggacctgtcctcgtggacccgggcgctggtgcaggggggg
cattccgctgcagaactgattaaggagatctccattggttgcatgctgaacaggcaggac
gttcgcctcacgcttcattatgagaagggcttcactgtgacccgggagtcaagggagcct
gcagtgggcactgtgctcttcagataccccttcgagaagctcaagatgtccacagacgat
gggatccgcaacctttacctggactttggaggtccagagggtgaaatggtgtttgacctg
cactctggccccaagcctgtggtgtttgttcttcattccttcctgtcggccaaactgtct
cgtctgggcctgctgacgtga
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