Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370893
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Entry
139370893 CDS
T10872
Name
(RefSeq) serine/arginine-rich splicing factor 3-like
KO
K12892
serine/arginine-rich splicing factor 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139370893
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139370893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139370893
Spliceosome [BR:
ocla03041
]
Common components
Common spliceosomal components
SR proteins
139370893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
139370893
NCBI-ProteinID:
XP_070966857
LinkDB
All DBs
Position
17:44189677..44197785
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AA seq
172 aa
AA seq
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MGEPAHLRDCPLDCKVYVGNLGNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDP
RDATDAVRELDGRTLSGCRVRVELSNGEKRSRSRGPPPSWSRRPGRDDYSSRRRGSPPVR
RRSPRRRSFSRSRSRSPSRDRRRDRSISRDRNHKPSRSFSRSRSRSRTTERK
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacctgctcatctcagagattgtcctcttgattgtaaggtatatgttgggaac
ttgggcaacagtggaaacaagactgagttggagagggcgtttgggtactatggccccctg
cgtagtgtgtgggtggcgaggaaccccccaggctttgcctttgtcgagtttgaggacccc
cgagatgcaactgatgctgtgagagaattggatgggaggactctgtctggctgcagagtg
agagttgagttgtccaatggtgagaaacgctcgaggagccgcggacctccaccctcctgg
agccgtcgccctggacgtgatgactacagcagcaggcgccgtgggagcccgcctgtcaga
cgccgctctcctaggaggaggagcttcagccgcagtcgcagcaggtctccgtcacgagac
agaagaagagataggtctatctccagagacaggaaccataaaccttcaagatccttctca
cggtcccggagccgctctaggaccacggagagaaagtga
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