Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370997
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Entry
139370997 CDS
T10872
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04517
IgSF CAM signaling
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139370997
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139370997
09143 Cell growth and death
04210 Apoptosis
139370997
09144 Cellular community - eukaryotes
04530 Tight junction
139370997
04540 Gap junction
139370997
09142 Cell motility
04814 Motor proteins
139370997
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139370997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139370997
03036 Chromosome and associated proteins [BR:
ocla03036
]
139370997
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139370997
04147 Exosome [BR:
ocla04147
]
139370997
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139370997
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139370997
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139370997
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139370997
Exosomal proteins of other body fluids (saliva and urine)
139370997
Exosomal proteins of colorectal cancer cells
139370997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139370997
NCBI-ProteinID:
XP_070967057
LinkDB
All DBs
Position
17:47580786..47584118
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGKMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPCN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEGEDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctcggtccatgtgggccaggctggagtccagatcggcaatgcatgc
tgggagctgtactgtcttgagcatgggatccaaccagatggcaagatgcccagtgacaag
accattggaggaggtgacgactcctttaacaccttcttcagtgagactggagctggcaag
cacgtccccagggctgtgtttgtggatctggagcccactgtcattgatgaggtgcgatct
ggaacttaccgccagctcttccaccctgagcagctgatcactgggaaggaggatgcagcc
aacaactacgcccgtgggcattacaccatcggcaaagagatcatcgacttggttctggac
aggatccgcaaactggctgaccagtgcactggcctccagggcttcctggtcttccacagc
tttggaggtggcaccggttctggtttcacttccctgttgatggaacgcctgtctgttgac
tatggcaagaagtccaagcttgagttctccatctacccagctccccaggtgtccacagct
gttgttgagccctacaactcaatcctgaccacccacaccaccctggagcattctgactgt
gctttcatggtagacaatgaggccatctatgacatctgccgtaggaacctcgatatcgag
cgtccttcctacaccaacctgaacaggttgatcagccagattgtgtcctcaatcactgct
tccctccgattcgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctatccccgtatccacttcccccttgccacctatgccccagtgatctcagcagagaag
gcttaccatgagcagctgactgtttcagagatcacaaatgcctgttttgagccatgtaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgtctgctgtaccgt
ggcgacgttgtgcccaaagatgttaacgctgccattgccaccatcaaaacaaaacgctcc
atccagtttgtagactggtgcccaactggtttcaaggttggtatcaactaccagccccca
actgtggtacctggtggagatctggccaaggtccagagggcagtgtgcatgcttagcaac
accactgcagtggctgaggcttgggcccgccttgaccacaagtttgacctgatgtatgcc
aagcgtgcattcgtgcactggtacgtaggtgagggtatggaggagggagagttctctgag
gccagggaagacatggctgccctggagaaagattatgaggaggtgggcgcagatagcgtg
gaaggagaggatgagggagaagagtactaa
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