Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370999
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Entry
139370999 CDS
T10872
Name
(RefSeq) gigaxonin
KO
K10453
kelch-like protein 16 (gigaxonin)
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139370999
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
139370999
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Gene cluster
GFIT
Motif
Pfam:
Kelch_1
BACK
Kelch_6
Kelch_KLHDC2_KLHL20_DRC7
BTB
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_4
Kelch_3
Kelch_5
NANM
DUF1668
BTB_3
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
139370999
NCBI-ProteinID:
XP_070967063
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Position
2:complement(59671608..59685489)
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AA seq
608 aa
AA seq
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MSSTESEVSVAGSVVSDPQHSQKLLKALRSFWQEQCFQDAVLVLDGEKIPVQKNILAAAS
PYIRTKLNYNPPKEDGSMYTIELQGISVTIMKQILDYIFSGEISLSEDTIQDMVQAADLL
LLTDLKSLCCQFLESCIAAENCIGIRLFSLHYCLHHVHHVATDFLQTHFRDVAATDEFRE
LPPDRLCEILSMEKLNVGNEKHVLEAVVRWLGHDLEERRVHMKEVMSSVWIQGLDQGYLR
EQVLGEPLMREVIREYCNAPLGGAALQGEALLAAFKPRGYSECIVTVGGEERGTRKPSAM
ARCMCPLYDPNRQLWIELEPMSIGRIGHGVLAAEGYLFVMGGMDETKMVLSSGEKYDPDT
NTWTPIPSMKQARQNFGVAELDGMIYVLGGEDEDIELLTVEVFDPHFNTWTTQTSMTMVR
KIGCYATMKKKIYAMGGGSYGKLYDSVECYDPKTKQWTAICPLKERRFGSVACGVGQELY
VFGGVRSRDSDNPESSTMTTCKSEFFHDEMKRWMYLDDQTLCVQTSSSFVYGAVPIGASI
YVVGDLDTGTTYDYVREFRRSSGTWHRTKPMLTSDLCKTGCAALRIANCKLFRLQLKQGL
FRLRVPTS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtactgagtccgaggttagcgttgcaggttcggtggtgtcagaccctcaacac
tctcagaaacttctcaaggcccttcgctccttttggcaagaacaatgcttccaagacgca
gtgttagtactggacggggaaaagattccagtccagaaaaacattttggctgcggctagt
ccatacatcagaacaaaactgaactacaaccctccaaaggaagatggatccatgtacacc
attgagcttcagggaatctctgtcactatcatgaagcagatcctggactacatctttagt
ggggagatcagtctgagtgaggacaccattcaggacatggtccaggctgctgacctgctg
cttctgacagacttgaagtccctgtgctgccagttcctagagagctgcattgctgccgag
aactgcattgggatccggctcttctctctacattactgtctgcaccatgttcaccatgtt
gccacagacttcctccagacacatttccgtgatgtggctgccacggacgagttcagggag
ttacccccagaccggctgtgtgagatcctgtccatggagaagctcaacgtgggcaatgag
aagcatgtcctggaggctgtggtgcgctggctcggtcatgacctggaggaacggagggtg
cacatgaaagaggtgatgtcatcagtgtggatccagggcctggaccaaggttacctgagg
gagcaggtattgggagagcccttgatgagggaggtgatcagggagtactgcaacgctcca
ctggggggtgctgcactgcagggtgaggctcttctagctgccttcaaacctcgtggctac
tcggagtgcatcgtcactgtaggaggggaggagagaggaacgaggaagccgtcagccatg
gcacgctgcatgtgtccactctatgatccaaaccgtcagctgtggatcgagctggaacca
atgagcattggccgaatagggcatggggtgctggctgcagagggctacctctttgtgatg
ggtggtatggatgaaactaagatggtcctgagcagtggggagaaatatgacccagacaca
aacacctggaccccaattccttccatgaaacaggcgaggcagaactttggtgttgcagag
ctggatgggatgatctatgttttgggaggagaggatgaggacatagagctcctgactgta
gaggttttcgaccctcactttaacacctggacaacccaaaccagcatgacaatggtccgc
aagattggctgctatgccaccatgaaaaagaagatctatgcaatgggtggtgggtcatat
ggaaagctgtacgactcagtagaatgctatgatccaaagaccaagcagtggactgcaatc
tgccctttgaaagagagaaggtttggctcagtggcatgtggtgtgggtcaggaactctat
gtgtttggaggcgtgaggagccgtgactcagacaacccagaatccagcaccatgaccacc
tgcaagtctgagtttttccatgatgagatgaaaagatggatgtaccttgatgaccagact
ctctgtgttcagaccagttcctcttttgtgtatggcgctgtccccattggtgccagcatc
tatgtagtgggagacttagacactggtacaacctatgactatgtgagagaattccgtcgc
agctcggggacgtggcaccgcaccaagcccatgctgacatctgatctgtgcaagactggc
tgtgcagccctgcgcatcgctaactgcaaactgttccgtctgcagctgaagcagggcctg
tttagactcagggtcccgacctcctag
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