Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371064
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Entry
139371064 CDS
T10872
Name
(RefSeq) ruvB-like 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082
ATP-dependent chromatin remodeling
ocla04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139371064
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139371064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139371064
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139371064
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
139371064
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
139371064
Chromatin remodeling factors
SRCAP complex
139371064
INO80 complex
139371064
INO80 complex (yeast)
139371064
SWR1 complex
139371064
ASTRA complex
139371064
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Dynein assembly factors
139371064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
RuvB_N
AAA
AAA_22
AAA_16
AAA_5
AAA_19
AAA_18
Mg_chelatase
AAA_28
Sigma54_activat
IstB_IS21
AAA_25
DnaB_C
bpMoxR
PhoH
nSTAND3
Parvo_NS1
Zeta_toxin
AAA_7
ATPase
ResIII
AAA_30
AAA_11
TsaE
RNA_helicase
SLFN-g3_helicase
AAA_33
NPHP3_N
DEAD
Motif
Other DBs
NCBI-GeneID:
139371064
NCBI-ProteinID:
XP_070967212
LinkDB
All DBs
Position
17:51955656..51965772
Genome browser
AA seq
456 aa
AA seq
DB search
MKIEEVKSTTKTQRVASHSHVKGLGLDEAGNAKQNASGLVGQEAAREACGIIVELIRSKK
MSGRAVLLAGPPGTGKTALALAMAQELGNKVPFCPMVGSEVYSSEIKKTEVLMENFRRAI
GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTGKGTKQLKLDPSIYESL
QKERVEAGDVIYIESNSGAVKRQGRCDTFATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL
HDLDIANARPQGGQDILSMMGQLMKPKKTEITDKLRAEINKVVNRYIDQGVAELVPGVLF
VDEVHMLDIECFTYLHRALESTIAPIVVFASNRGNCLIRGTEDISSPHGIPLDLLDRVMI
IRTMLYTPQEMKQIIKIRAQTEGINISEEALSHLGEIGTKTTLRYAAQLLTPASLLGRVQ
GKEGVEREQVEEINELFYDAKSSAKILQDQQHKYMK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgaagaagtgaaaagcaccacgaaaacgcagcgcgtcgcctctcacagccat
gtgaaaggactcgggctagacgaggccgggaatgcaaagcaaaatgcgtcaggtcttgtg
gggcaggaggctgcaagagaggcttgtggtattattgtggaactgattcgctcaaagaag
atgtcaggaagggcagttttgctggctggacctcccggtacaggaaagactgccctggct
ttggctatggcacaggaactaggcaacaaggtgccattctgccccatggtgggtagtgag
gtctactcttcagagatcaagaaaacagaggtgctgatggagaacttcaggagggcaata
gggctgcgtatcaaggaaaccaaggaggtgtatgagggggaggtcacagagctgaccccc
tgtgagacagagaaccccatgggtggttacgggaagaccatcagccatgtcatcatcgga
ctgaagacaggcaagggcaccaagcagctcaagctggatcccagtatttatgagagcctg
cagaaggagcgtgtggaggcgggagacgtcatctatattgaatcaaacagtggagccgtc
aagagacaaggtcggtgtgacacatttgccacagagtttgacctggaggctgaggagtac
gtgccgctgcccaagggggacgtccacaagaagaaagagataatccaagacgtcacgcta
cacgacctggatattgccaacgctagaccacagggaggtcaagatatcctgtctatgatg
ggacaactgatgaagcccaagaagaccgagatcacagacaagctgcgagctgagatcaac
aaggtggtaaaccgttacattgaccagggtgtggctgagctggtccccggggtgctgttt
gtggacgaggtgcatatgctggacattgagtgtttcacctacctgcaccgagccctggag
agcaccatcgcacccatcgtagtgttcgcctccaacaggggcaactgcctcatcaggggg
acagaggacatcagctctcctcatggcattcctctggacctgctggacagggtcatgatc
atccgcaccatgctctacacaccacaggagatgaagcagatcattaaaatccgagctcag
actgaagggatcaacatcagcgaggaggccctcagtcacctgggagagattggaactaag
accaccctcaggtatgcggcgcagctgctgaccccagccagtctgttaggcagagtccag
gggaaggagggagtagagagggagcaggtggaggagatcaacgaactcttctacgatgcc
aagtcctccgctaagatcctccaggaccagcagcacaagtacatgaaataa
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