Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371069
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Entry
139371069 CDS
T10872
Name
(RefSeq) DNA topoisomerase I, mitochondrial
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocla03032
]
139371069
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139371069
DNA replication proteins [BR:
ocla03032
]
Eukaryotic type
DNA Topoisomerases
139371069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
139371069
NCBI-ProteinID:
XP_070967222
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All DBs
Position
2:complement(60380335..60414381)
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AA seq
752 aa
AA seq
DB search
MGGEKNVGQARGGKAKAKTPRQRLSDKEGGSGGDAPRKSTKPNKERTKATAKSQRVEKVK
VQKKVKAFKTESVESFDDDVRFNLAVKEEPEDGDFVPEKRGKKRKRPEDEPMEGPSCSSA
TPTFNRKLKEKDEADPRTENNTEGIKKEKKPKKEEAEHPVTTKKKSKEEIEAAKALKIKK
REEEEQQRWRWWEEDKYEDGVKWKFLEHRGPFFPPEYQHLPDNVNFYYNGKVVKLGLAAE
EVALFFAQMLDHEYTTKDVFRNNFFKDWRKEMTLEERVLISDLNKCDFRELHTMHKEKVE
ARKAMSKEEKLVMKEANQKIVEEYGFCILDHHRERIGNFKIEPPGLFRGRGEHPKQGMLK
KRIQPEDVIINCEKKSCIPEPPAGHHWKEVRHDNTVTWLASWTENVQGSCKYVMLNPSSK
LKGEKDWEKYEVARRLKSCVNGIRQQYQQDIKSKQMEIRQRAVALYFIDKLALRAGNEKE
EGETADTVGCCSLRVEHITLHDLLEDKECVVEFDFLGKDCIRYYNKVPVTKRVFKNLKLF
MKNKEPGDDLFDRLNTCLLNKHLSSLLPGLTAKVFRTFNASITLQEQLQQLSNMTDKPAE
KLLSYNRANRAVAVLCNHQRVPPKTFDQSMANLQSKIDGRREQLALAKSELKLAKKEVKA
HSSDSKLQAVVERKKKAVQRCEEQLMKMEVQATNREENKQIALGTSKLNYLDPRISVAWC
KNMEVPLDKIYNKSQRDKFAWAVDMTGADFIF
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgggcggagagaagaatgttggccaagccagaggagggaaggccaaagcgaagacaccc
agacagaggctgagtgataaggaaggaggctcgggtggagacgcacctaggaaaagtaca
aagcccaataaggaaagaactaaagccacagcaaagtctcagcgggtggaaaaagtaaaa
gttcagaaaaaggtcaaggctttcaaaacggagagcgtggagagctttgatgatgatgtg
aggtttaatttggctgtaaaagaggagcctgaagatggagactttgtgccagaaaagagg
gggaaaaagaggaaaagaccagaggatgaacccatggaaggtccctcgtgttccagtgca
accccaacgtttaataggaaattgaaagagaaggacgaggctgacccgaggacagagaat
aacacagaggggataaagaaagagaagaagccaaagaaagaggaggcggagcatccagtc
actacaaagaagaagtcaaaggaagagattgaggcagcaaaagcgttgaagatcaaaaaa
agagaagaagaagagcagcagcgctggagatggtgggaagaggacaagtatgaggatggt
gtaaaatggaagtttctggagcacaggggtccctttttcccaccggagtaccagcatctc
ccagacaacgttaacttctactacaatggtaaagttgtgaagctgggccttgctgcagag
gaggtggccctgttctttgctcagatgcttgaccatgaatacaccacaaaagatgtgttc
cgaaacaacttcttcaaggactggaggaaggagatgaccctggaggagagggtgctaatt
agtgacctgaataagtgtgactttcgggagctccacaccatgcacaaggagaaggtggag
gctaggaaggccatgagcaaagaggagaaactggtgatgaaagaggccaatcagaagata
gtggaggagtatggcttctgtatactggaccaccaccgggaacgcatcggcaactttaag
attgagccgccaggtctcttccgaggacggggggagcaccccaaacaaggcatgcttaag
aagaggatccagccggaggacgtcatcatcaactgtgaaaaaaagtcttgtatcccagag
ccccctgctggtcaccactggaaggaggttcgccatgacaacacagtgacctggctggcc
agctggactgagaatgttcagggctcctgcaagtatgtcatgctcaaccccagctccaaa
ctcaagggtgagaaggactgggagaagtatgaggtggcccgccggttgaaaagctgtgtg
aatgggatccgccagcagtaccagcaggacatcaagtccaaacagatggagatccgccag
agagctgtggccctttacttcatagataagctggccctgagagcgggtaacgagaaggag
gagggcgagacggcggacacggtgggctgctgctccctgagggtggagcacatcaccctc
cacgacctgctggaggacaaggagtgtgtggtggaatttgacttcctgggtaaagactgt
atccgctactacaacaaggttcccgtcaccaagagggtgttcaagaacctcaagctcttc
atgaagaacaaggagcctggagacgacctgtttgatcgcctcaacacgtgcttgttgaat
aagcacctgtcatccctgctgcctggcctgactgctaaggtattcaggactttcaacgcc
tccatcaccctgcaggagcagctccaacagctgtccaacatgaccgacaagccggcagag
aagctgctctcctacaacagggccaaccgagctgttgcagttctgtgtaaccaccagcgg
gtgccgccaaagacctttgatcagtctatggccaacctccagtccaagattgatggcagg
agggagcagttggccctggccaagagtgagctgaagctggccaagaaggaggtcaaagct
cacagttcagacagcaagctgcaggcggtggtggagcgtaagaagaaggctgtgcagcgc
tgtgaggagcagcttatgaagatggaggttcaggccacaaaccgagaggagaacaagcag
atcgcactgggcacctccaaactcaactacctggacccacgcatcagcgtggcctggtgt
aagaacatggaggtgcccctggacaaaatttataataaatctcagagggataagtttgcc
tgggctgttgacatgaccggggcagattttatattctaa
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