Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371091
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Entry
139371091 CDS
T10872
Name
(RefSeq) myosin light polypeptide 6 isoform X1
KO
K12751
myosin light chain 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04270
Vascular smooth muscle contraction
ocla04530
Tight junction
ocla04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139371091
09142 Cell motility
04814 Motor proteins
139371091
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
139371091
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139371091
04147 Exosome [BR:
ocla04147
]
139371091
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139371091
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139371091
Exosomal proteins of bladder cancer cells
139371091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_6
EF-hand_7
AIF-1
EF_EFCAB10_C
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
139371091
NCBI-ProteinID:
XP_070967256
LinkDB
All DBs
Position
17:52841285..52849492
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AA seq
180 aa
AA seq
DB search
MSIVFLTFASIGLHSPDLRPLTGFEPSPEMSDFSEDQIIEFKEAFLLFDRTGDGKISYSQ
CGDVMRALGQNPVNAEVLKVLGNPKSEEMNHKMLDFEQFLPMLQAIAKNKDQGSFEDFVE
GLRVFDKEGNGTVMGAELRHVLTTLGEKMTEEEVETLLAGHEDANGCINYEELVRMVMSG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagttttcttaacgttcgcgtctatcggtctacattcccctgacctccgcccg
ttgacaggattcgaaccaagcccagaaatgtctgacttctcagaagaccagatcattgag
ttcaaggaggccttcctgctgtttgacaggacgggcgatgggaagatcagctacagccag
tgtggtgatgtcatgcgggccctcggccagaaccccgtcaacgctgaggtcctcaaggtc
ctgggcaaccccaagtcagaagaaatgaaccacaaaatgctggactttgagcagttcctg
cccatgctacaggccatcgctaaaaacaaggaccagggctcctttgaggactttgtggag
ggtctgcgtgtctttgacaaggagggcaacggcacagtgatgggcgctgagctgcgccac
gtcctcacaacactcggtgagaaaatgacagaagaggaggtggagactctgttagcagga
cacgaagatgcaaacggctgcatcaactatgaagaactcgtccggatggtgatgagtggt
tga
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