Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371115
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Entry
139371115 CDS
T10872
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 2
KO
K04601
cadherin EGF LAG seven-pass G-type receptor 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04310
Wnt signaling pathway
ocla04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139371115
09133 Signaling molecules and interaction
04519 Cadherin signaling
139371115
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139371115
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139371115
04515 Cell adhesion molecules [BR:
ocla04515
]
139371115
Peptidases and inhibitors [BR:
ocla01002
]
Mixed peptidases
Family P2
139371115
G protein-coupled receptors [BR:
ocla04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
139371115
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Major cadherins
139371115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
7tm_2
Cadherin_CELSR2_9th
Laminin_G_2
GAIN
GPS
Laminin_G_1
Cadherin_FAT4_N
Ig_CLSTN
EGF
Fibulin_C
EGF_laminin
EGF_TEN
ConA_2nd_BAM2
hEGF
Peptidase_M27_Wo
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
139371115
NCBI-ProteinID:
XP_070967294
LinkDB
All DBs
Position
17:complement(53660904..53743812)
Genome browser
AA seq
3035 aa
AA seq
DB search
MPVIKWDLLFIFGWFELISLSNCYNVHISEDAEQRTVIASVEQSGACTLDQVIAPKFSKT
FIETDASARVVFLSGSLNCASLSSNPFTVYTVVDCMNNVPGLRHLLTSQYDVYVHGRNCS
SKHKRKSQWDLEIISLFKAHNHQLECHESGTALLRVWDLLPGSPTHSSMHCKVIRSSELY
FSEGQLFVSKTLCLKHDTLLELDLHCNQYTGDERESRVNSISVHWRVGQGSFKQGHLGKL
LQQAAQSESGIVSRSKRAVNSSPQFQPPMYQVAVAENKPAGTPVVVLKAVDADEGEAGRL
EYFIEALFDSRSNNLFAVDPVNGAVSTVEVLDREQKDTHVFRVTAVDHGTPRRTAMATLT
ITVSDSNDHDPVFEQQDYKESVRENLEIGYEVLTVRATDGDAPVNGNILYHVLNSNGSNN
VFEIDSRSGVIRTKGPVDREMVEAYMLLVEANDQGRDPAPRSATATVHIIVEDDNDNAPQ
FSEKRYVVQVPEDMAPNTEILQVIATDQDRGSNAMVHFSIMSGNTRGQFYIDAQTGKMDL
VSQLDYEANKEYTIRIRAQDGGRPPLSNISGLVTVQVLDVNDNTPIFVSTPFQATVLENV
PVGYSIIHIQAVDADSGDNSRLEYRLIETMPNFPFSINNSTGWIVVAADLDRESMDFYNF
GVEARDHGHPVMSSSASVSMTILDVNDNNPEFTQRSYYMRLNEDAIVGTSVVTVSAVDQD
INSVVTYQISSGNTRNRFSITSQSGGGLITLALPLDYKLERQYVLSVTASDGTLFDTAKV
FVNVTDANTHRPVFQSSHYTVNINEDRPVGTTVVVISATDEDTGENARITYFMDDSIPQF
DIDSDTGAVTTQMELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNSPRFLRD
HYLGSVMEDVPVFTSVVQVSATDRDSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLRR
LDRENMPFYNLQAFAVDKGVPALKTSVDIQVTILDVNDNPPVFEKDEFDIFVEENSPIGL
VVAHVSASDPDEGSNAQIMYQIVEGNIPEVFQLDIFSGELTALTDLDYETRSEYVIVVQA
TSAPLVSRAIVHIKLVDKNDNVPVLKNFQIIFNNYVTDKSSSFPTGVIGRIPAHDPDASD
QLQYSFEAGNELNLVILNQSTGEIRLSQALDNNRPLEASMRISVSDGIHSVSAQCLLQVT
IITDEMLSNSITLRLANTSQEHFLSLLLAQFLEGVARVLSADREDVVVFNIQDDTDVSAR
ILNVSLSVAVPSHREDLPGGGGGRDRVGRGASGASGGAEFFGSEELQERLYLNRSLLAHI
SSQQVLPFDDNICLREPCENYMKCVSVLKFDSLAPFVASDTILFRPIHPIAGLRCRCPTG
FTGDYCETEIDLCYSKPCGAHGLCRSREGGYTCECLNDYTGKRCELSSRSGRCGPAVCKN
GGTCVNLLVGGFKCECPSGGYEKPYCEMTTRNFPLQSFLTFKGLRQRFHFTLSLSFATKE
PNGLLLYNGRFNEKHDFIAVEIINEQIQLTFSAGETKTTVSPYILGGVSDGQWHVVQVHY
YNKPILNQASMPQGPSDQKVVVVTVDNCDTSVALRFGHVIGNYTCSAQGSQSGSKKSLDL
TGPLLLGGVPKLPEDFPIQNRQFVGCMKDLRIDNRHVDMASFIANNGTLPGCSAKRHFCN
NNPCLNGGTCVNMWGSFSCDCPLGFGGRNCEKVMANPQRFLGNSLLQWTNLVAVVTVPWH
VELMFRTRQPSATLLHLTAGQHHNLTLQLRGGSVVMGLQRGEDSTLSQVEEVTVNDGDWH
HVQMELKDIPGGEPRHKAVLSFDHGLYTASMEVDTKLKGAKVKTLSVGGITGADGKIQHG
FRGCVQGLRVGETSSSSVSLSLSQARRVNMEQGCSVPDPCVSNTCPSNSYCSDDWDSHSC
TCLTGYYGDNCTDVCALNPCEHQSACTRKVSSSRGYTCDCPSNYFGQYCEKKTDLPCPRG
WWGHKTCGPCDCQTDKGFDADCNKTSGECRCKDNHYRPEGSEVCLLCECYPVGSFSRACE
RESGQCQCKPGVIGRQCDHCDNPFAEVSPNGCEVIYDSCPQAIEAGIWWPRTKFGLPAAV
PCPKGSIGTAIRHCDEHKGWLPPNLFNCTSVTFTKLKTLSEKLSHNVSLLDSGRVQQMAA
MLANATLHTVEYYGSDVKVAYRLTQSLLQYESHQQGFSLTATQDVHFTENLVQVGSAILS
PGTRPHWELIQQTEGGTATLLHQYEEYANTLAQNMRKTYLSPFTIVTPHIVISIDRLQKM
NFAGAKLPRYQSLRGLRPQDQETAVTLPDSVFKPPMETKGHRHLDTFPESSVRNQTSSRK
RRHRGPDDPEQEAIASVIIFHSLASLLPASYDPDKRSLRVPKRPVINSPVVSITVHDNEE
LLQHMLDKPITVQFRMVTTEERSKPICVFWNHSILAGNGGWSAKGCEVVFRNNTHISCQC
YHMTSFAVLMDISRRENGEILPVKLVTWSTVSVTLGFLFLTTLFLLCLRAMHCNKTSIIN
NGATALFISELIFILGINLADNPFVCTIIAILLHFFYLCTFSWLFLEGLHVYRMLSEIRD
INYGPMRFYYMIGWGVPAFITGLAVGLDPEGYGNPDFCWLSVYDTLIWSLAGPIAMVVSM
NIFLYILASRASCSMRHHSFEKKEPPISGLRTSCGVLLLVTVTCLLAILSVNSDMIIFHY
LFAGFNCLQGPFIFFFRIVFNKEARNAMRYCCSRKRPDHMIKSKPSSYNCNTSYMDGRLY
HLPFGDSSVSLNDTLQSGKSQQSYVPFVLRDDGGLNNSQVHIALNEHGSLFHETKEHLDD
HDSDSDSDLSLEDDQSGSYASTHSSDSEEEGPYPPDECWESMASNVSKRPHPQDNNLSKL
YWPGEFVTTASNSEGLGGAGRLKVESLGNPELGQTRDHRGMPDDRPGDKAEGYGKDHVML
LPSLPNLSAHPQKGILKKKQLSPIAERNGINRIHNELSENALGHASSQGSSSGESRGGGA
KPSLPDQLNGVAMSIKAGTVDGDSSGSDSHRNPSI
NT seq
9108 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcattaagtgggatttgttgtttattttcggctggtttgaactcatttcactc
tcgaattgctacaatgtacacatcagtgaggatgcggagcagcggacggtgattgcaagt
gttgaacagagcggggcatgcactttggatcaggtaatcgctcctaaattctcaaagacc
tttattgaaactgatgcgtccgcgcgcgttgtgttcctttcaggtagtttaaattgtgcc
tcgctcagctccaaccctttcaccgtgtacactgttgtggactgcatgaacaatgtccca
gggttgaggcacctcctcacaagccagtatgatgtgtatgttcacggcaggaactgttca
agtaaacacaaaaggaaatcacaatgggacttggagataatcagtttgtttaaagcccat
aatcatcagttagaatgccacgagtctggtactgcgctcctccgggtatgggatctacta
cccggctctccaacccacagcagtatgcactgcaaggtgattcggagttcggagttatat
ttttctgaggggcagttgtttgtgtccaagacgctgtgtttgaaacacgacacacttctt
gagctagacttacattgtaaccaatacacaggagatgagagggaatccagagtgaacagc
atctcagtccactggcgggtgggtcaaggctccttcaaacagggccacttggggaagtta
ctacagcaggctgcccagtctgaatcaggcatagtgagcaggagcaagagggctgttaac
agtagcccccagtttcagcctcctatgtaccaggtagcagtggcagagaataagccagct
ggaactcctgtagttgttttgaaggcagtagatgctgatgagggggaggcaggcaggctg
gagtacttcatagaggccctgtttgacagccgctccaacaacctatttgctgtggaccca
gtcaatggtgccgtctccactgtggaggtgctggatagagagcagaaggacacccatgta
ttccgtgtgaccgctgttgaccatggcactccccgccgtacggccatggccaccctcacc
atcacagtgagtgacagtaacgaccatgatcctgtctttgagcaacaggactacaaggag
agtgttagggagaacctagagatcggctatgaggtgctgaccgtcagggccacagacgga
gacgccccggttaacggtaacatcctgtaccacgtcctcaacagcaacggttcgaacaat
gtttttgagattgactccaggtcaggggtgatccgcacgaagggcccagtggatagagag
atggtggaggcctacatgctgttggtagaggccaacgaccagggtcgtgaccccgccccc
cgcagtgccaccgcaactgttcacattattgtagaggacgacaatgataatgctccccag
ttcagtgaaaagcgatatgtggtgcaggttccggaggatatggcacccaacacagaaatc
ctgcaggtgattgccacagaccaggacagagggagtaatgccatggttcacttcagcatc
atgagtggtaacaccaggggccagttctacattgacgcccagacaggcaagatggacctg
gtcagtcagttggactacgaggctaacaaggaatacaccattcgcatccgcgctcaggac
gggggacgcccgccgctctccaacatcagtggcctggtaacggtgcaggtgctggatgtc
aatgataacacccccattttcgtcagcacccccttccaggccactgtgctagagaatgtg
ccagtgggttactccatcattcacatccaggctgttgatgcagactctggcgacaattct
aggctggagtaccgcctcattgaaacaatgcccaacttcccattctccatcaacaacagc
actggttggatagtcgtagccgctgatctggacagggagagcatggacttctacaacttt
ggggtggaggcccgtgatcatggccacccggtgatgtcttcctcagctagcgttagcatg
accatcctcgacgtcaacgacaacaacccagagttcacacagaggtcatattacatgcgc
ctcaatgaggacgccatcgtggggacaagcgtggtgacggtgtctgcagtggaccaggat
atcaacagtgtggtgacgtatcagatctccagtgggaacaccaggaacaggttctccatc
accagccagagtggagggggcctcataaccctggccctgccccttgactacaagctggag
cgccaatacgttctaagtgtcactgcgtctgacggcacactcttcgacaccgccaaggtg
ttcgtcaacgtcaccgacgccaacacccacaggcccgtgtttcagagctcccattatacc
gtcaacatcaatgaggacagacctgttggcaccaccgttgtggtgatcagtgctacagat
gaggacactggggagaatgcacgtataacctacttcatggatgacagcatcccccagttc
gacatcgactccgacacaggcgctgtcaccacccagatggagctggactatgaagatcag
gtgtcctacacgttagccatcacggctcgggacaacggcatcccacagaagtctgatact
acctacctggagatcctggtgaatgatgtgaatgacaactctcctcggttcctccgagac
cactacctaggctctgtgatggaggacgtgccagtgtttaccagcgtcgtccaggtctct
gccactgaccgagactctggcctcaatggacgtgtcttctacactttccaggggggagag
gacggcgatggagacttcataattgagtccacctctggtattgtgcgaacgctgcgtcgc
ctggaccgtgagaacatgccattctacaacctgcaggcctttgctgtggataaaggtgtt
cctgctctcaagacgtccgtggacatccaggtgaccattctagatgtcaatgacaaccct
cctgtgtttgagaaggatgagtttgacatatttgtggaggagaacagcccaataggcctg
gtagtggcccacgtatctgcctcggacccagacgaggggagcaacgcccagatcatgtac
cagatagtagagggaaacatcccagaggtgttccagctggacatcttctcaggagaactg
actgctctgacagatctcgactacgaaacacggtcagagtatgtcatcgtggtccaggcc
acctcagccccacttgtcagccgtgccattgtgcacatcaagctggttgacaagaatgac
aacgtaccagtgctgaaaaacttccagatcatcttcaataactatgtcactgacaagtcc
agtagcttccccacaggggtgatcgggcggatccctgcccatgacccagacgcctcagac
cagctccagtacagctttgaggctggtaatgagctgaacctggtcatcctgaaccagagc
acgggggagatccggctgagccaggccctggacaacaacagacccctggaggcctccatg
aggatatctgtctcagatgggatccactctgtgtcggcccagtgtctgctccaggtcacc
atcatcacagacgagatgctctccaacagcatcacactgcgattggccaacacttcccag
gagcacttcctgtccctgctattggcccagttcctggagggcgtggcccgtgtgctgtca
gctgaccgcgaggacgtggtggtgttcaacatccaggatgacacggacgtcagcgcccgc
atcctcaacgtcagcctgtctgttgccgtgccctcgcacagggaggacctgcccggggga
ggaggggggcgcgacagggtgggcagaggggcatcaggggccagtggtggggcagagttc
tttgggtctgaggagcttcaagagaggctgtacctgaaccgcagcctgctggcccatatc
tcttcccagcaggtgctgcccttcgatgacaacatctgcctgcgagagccctgtgagaac
tacatgaagtgtgtgtctgtgttgaagttcgacagcctggcaccctttgtggcgtccgac
accatcctgttccggcccatccaccccatcgccgggctgcgctgccgctgccccacgggc
ttcacaggagactactgtgagacagagatcgacctgtgctactccaaaccctgcggagcc
cacggcctgtgtcgcagcagagagggaggctacacctgcgagtgcctcaatgactatact
ggcaagcggtgtgagctatcgtcccgctccgggcgctgcggcccagctgtgtgtaagaat
gggggcacctgtgtgaacctgctggtgggggggttcaagtgtgagtgcccatctggcggt
tatgaaaagccctactgtgagatgaccaccaggaacttccccctgcagtccttcctcacc
ttcaagggactccgccagcgcttccacttcaccctctccctctcatttgccacaaaggag
ccaaatggtttgttactctacaatggccgcttcaacgagaaacacgatttcatcgctgtg
gaaatcattaacgagcagatccagctcaccttctctgctggtgagaccaagacgactgtg
tcgccctacatccttggaggtgtcagtgatggccagtggcatgtggtgcaagttcactac
tacaacaagccaatcctaaaccaggccagcatgccccagggtccctctgaccagaaggtc
gtcgtagtaaccgtggacaactgtgacacctcagtggcactgcgatttggtcatgtaatt
gggaactacacctgctctgcccagggcagccaatcaggatccaaaaaatctctggatctg
actggtcctctcctcctagggggcgtgcccaaacttcctgaggacttccccatccagaac
cgccagtttgtgggctgcatgaaggacctgaggattgacaaccgccacgtcgacatggct
agcttcatcgctaacaacggcactctaccaggatgctctgctaaaaggcacttctgcaat
aacaacccatgtttgaacggagggacctgcgtcaacatgtggggctccttcagctgtgac
tgccccctaggatttggagggcggaactgcgagaaggtgatggccaacccgcagcgtttc
ctgggtaacagccttttgcagtggactaacctggtggcggtggtcactgtgccgtggcac
gtggagcttatgttccgcacacgccagcctagtgccaccctgctgcacctcaccgccgga
cagcaccacaacctcaccctacagctgcgcggtggcagtgtggtgatgggcctgcagagg
ggcgaggactccaccctgtcccaggtagaggaggtgacagtgaatgacggagactggcac
catgtgcagatggagctgaaagatatcccgggcggcgagccccgccacaaggctgtgctc
tcctttgaccatggcctctacacggccagcatggaagtggatactaaactgaagggggcg
aaggtcaagactctgagtgtcgggggcatcactggggctgatgggaaaatacagcatggc
ttccgcggctgtgtgcagggtctgcgtgtgggggagacctcttccagctcagtgtctctc
agcttgtctcaggccaggagggtgaacatggagcagggctgcagcgtaccagacccctgt
gtctctaacacctgcccctctaacagctactgcagtgatgactgggacagccactcctgc
acctgcctcaccggttactatggcgataactgcacagacgtatgtgcgctaaacccctgc
gagcaccaatcagcctgcaccaggaaggttagctcctcccgcggctacacctgtgactgt
cccagcaactactttggccagtattgcgagaagaagactgacctgccgtgtcccaggggt
tggtggggacataagacctgtggtccctgtgactgtcagacagataagggcttcgatgcc
gactgcaacaagaccagcggggagtgccgctgcaaggataaccactaccgtccagagggc
agcgaggtgtgtctgctatgtgagtgttacccagtgggctcgttctcacgggcgtgtgag
agggagagcgggcagtgccagtgtaagccaggggtcatcgggcgccagtgtgaccattgt
gacaaccccttcgctgaggtgtcgcccaacggctgcgaagtgatctatgacagttgtccc
caggcaatagaggcagggatctggtggcccaggactaagtttggtctccctgcagcagtc
ccctgtcccaagggatctatcggcacagctattcgccactgtgacgaacacaagggatgg
ctgccccccaacctcttcaactgtacctctgtcaccttcaccaaactcaagaccctgtcg
gaaaagctttcccataacgtgtctctcctggactctgggcgggtccagcagatggcagcc
atgttggccaacgccacgctgcacacggtggagtactacggcagtgatgtgaaggtggcc
taccgcctcacccagagcctactgcagtacgagagccaccagcagggcttcagcctgacc
gccacccaggacgtccacttcactgagaacctggtgcaggtgggtagtgccatcctgtcc
ccaggcacacggccacactgggagctgatccagcagacggaggggggcacggcgacccta
ctgcaccagtatgaagagtacgccaacaccctggcacaaaacatgaggaagacttacctc
agccccttcaccattgtcacaccacacatagtcatctcaatagatcgcctccagaagatg
aactttgccggagccaagctccctcgctaccagtctctgagagggctgaggcctcaggac
caggagactgccgtcaccctccccgattcagtgttcaagccgcccatggagaccaagggc
caccgccacctggacaccttcccagaatcctctgtgagaaaccaaacgtccagcaggaag
aggcgacatcgaggtcctgacgaccctgagcaggaggccatcgctagcgtgatcatcttc
cacagcctggcctcgttgctgcctgcgagctacgaccctgataagaggagtctgagagtg
cctaagcgtccagtcatcaactccccggtggtcagcatcacggtccatgacaacgaggag
ctgctgcagcacatgctggacaaacccatcactgtgcagttccgcatggtcaccaccgag
gagcgctccaaacccatctgtgtcttctggaaccactccatactagcggggaacggaggc
tggtcagccaaaggctgtgaggtggtgttcaggaacaacactcacatcagctgccagtgt
taccacatgaccagcttcgctgttctcatggacatctccaggagagagaacggtgagatc
cttccagtgaagctggtgacgtggagcacggtgagcgtgacactgggcttcctcttcctc
accacgctcttcctcctctgcctgcgggccatgcactgcaacaagaccagcatcatcaac
aacggcgccaccgccctcttcatctccgaactcatcttcatcctgggcattaacctggca
gacaacccgtttgtgtgcacaatcatcgccatcctgctgcattttttctacctgtgcacc
ttctcctggctcttcctggagggcctgcacgtctaccgcatgctgagcgaaatacgagac
atcaactacggacccatgcgattctactacatgatcggctggggcgtgcctgccttcatc
acaggcctggcggtcggactggacccagagggttatgggaacccagacttctgctggctg
tccgtgtacgatactctgatctggagcttggcagggcccatcgccatggtggtgtctatg
aacatcttcctgtatatcctggcctccagagcatcctgctccatgagacaccacagcttt
gaaaagaaagagccccctatctctgggctgaggacgtcatgtggggttctcctcctggtc
acggtcacatgtctgttagctatactctcagtcaacagtgacatgatcatcttccactac
ttgtttgctggattcaactgccttcaaggtcccttcatcttcttcttccgcattgtgttc
aacaaggaggcgaggaacgccatgcgctactgctgcagccgcaaacgcccggatcacatg
atcaagtccaagccctcgtcgtataactgtaacaccagctacatggatggcagactgtac
cacttgccgtttggagactccagtgtctctctgaacgacaccctgcagagcggcaagagc
cagcagagctatgtcccctttgtcctcagggatgatggtggcctgaataatagccaggta
cacatcgctctgaacgagcacggctcactcttccatgaaactaaagagcatttagatgat
cacgactcggactcggacagtgacctgtctctggaggatgaccagagcggatcgtacgcc
tccacacactcctctgacagcgaggaggaggggccctacccaccagatgaatgctgggaa
agcatggcatccaatgtgtctaagagaccacaccctcaggataacaacctgagtaagctg
tactggccaggggagtttgtgacgacagctagcaacagtgaaggcctggggggagcagga
aggctaaaagtagagtctctgggcaaccctgaactgggccagacacgggaccaccgaggc
atgccagacgacaggccaggggacaaggcagagggctatgggaaggaccatgtgatgctg
ctgcccagtctgcccaaccttagcgcacacccacagaaaggaatcctgaagaagaagcag
ctctcccccattgcggagagaaatggtatcaaccgcatccataacgagctgtccgagaac
gctcttggccacgcctcctcccagggctcctcctccggtgagagccgagggggcggggcc
aaacccagcttaccagatcagctgaatggtgttgccatgagcatcaaggcggggacagtg
gacggtgactcatcagggtcagacagccaccgcaacccctccatatga
DBGET
integrated database retrieval system
