KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371138
Entry
139371138         CDS       T10872                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04115  p53 signaling pathway
ocla04120  Ubiquitin mediated proteolysis
ocla04137  Mitophagy - animal
ocla04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139371138
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    139371138
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    139371138
  09143 Cell growth and death
   04115 p53 signaling pathway
    139371138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139371138
Enzymes [BR:ocla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139371138
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    139371138
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING Trm112p TerY_C
Other DBs
NCBI-GeneID: 139371138
NCBI-ProteinID: XP_070967333
LinkDB
Position
2:61785050..61835662
AA seq 335 aa
MSGRANVQPMNSWKGVLKLFTCIASRTTANKPKELPIFQEKKKALFGNLMDEEMSRQTAT
ALPTGTSKCAPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRP
KLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYS
CPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGF
HFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGI
ATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgtcgggcagagctaatgttcagcccatgaactcatggaagggggtgctcaagctcttc
acatgcatagcttctagaacaactgccaacaaacctaaagagttacccatttttcaagag
aagaagaaagccttatttgggaatcttatggacgaagaaatgagtcgccagaccgccaca
gcgctgcccacaggaacctccaagtgcgccccctcccagcgcgtccccaccttgtcgggc
actacggcctctaacagcgacctggccagcctgtttgagtgccctgtctgcttcgactat
gtgctgccccccatcctgcagtgccagagcggccacctggtctgcagcaactgccggccc
aagctcacttgctgccccacctgccggggcccgctgggctccatcaggaacctggccatg
gagaaggtggccaactctgtgctgttcccctgcaagtatgcgtcgtcgggctgtgaggtg
acgctgccccacacagacaaggcagagcacgaggagctgtgtgagttccggccatactcc
tgcccctgcccaggggcctcctgtaagtggcagggctcgttggacgcggtcatgccccac
ctcatgcaccagcacaaatccatcaccacgctgcagggcgaggacatcgtgttccttgcc
acggacattaacctgcctggggcagtggactgggtcatgatgcaatcctgcttcggattc
cacttcatgctggtcctggagaagcaggagaagtacgacggtcaccagcagttctttgcc
attgtgcagctgattggcacgcggaagcaggcagaaaactttgcctaccgcctggagctc
aacgggcaccggcgacggctcacctgggaggccacgccccgctccatccatgagggcatc
gccactgccattatgaacagcgactgcctagtgtttgacacttccatcgcgcagctgttt
gctgagaacggaaacctgggcatcaacgtcaccatatccatgtgctga

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