Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371169
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Entry
139371169 CDS
T10872
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139371169
03012 Translation factors [BR:
ocla03012
]
139371169
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
139371169
mRNA cycle factors
Stress granule specific factors
139371169
Translation factors [BR:
ocla03012
]
Eukaryotic type
Initiation factors
eIF-4
139371169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
Motif
Other DBs
NCBI-GeneID:
139371169
NCBI-ProteinID:
XP_070967405
LinkDB
All DBs
Position
17:58062322..58138115
Genome browser
AA seq
1797 aa
AA seq
DB search
MSLPAKIVPKPATVAVSGPGTGPSPSSQLRATLTSVSLPSGAPGAPQLNTLPPPQIFLNM
TRPRFSRVQPSLDDRIFPTQPGVAAVYSVPRHPGPPYTAHDYTKGHPNLAGTPPGHAHSQ
ALSQVSLPTASPYRYPKGWEAGGVSPYTTGQNSGSAPLVYSPQTQQMNTQPQSRPSSMPS
PSPSPPVMWNHQFATGPRPTHHQGGFRPIQFFQRAQMQTARPTIPTNAPSMRPCSQNPTS
AVYPPNQPTMMMMAPMPFPSPQAAQYYIPQYRHSTPYVGPPQQFSVQPPGSGTFYPGPSP
GEYPAQYAPGPQYYPGQQVYPPSPSIIVPTPQQPPPAKREKKPSSQIRIRDPNQGGRDIT
EEIMAGGTGSRNPTPPVGRPSSTPTPPQQQPGGSQTPEQSQGQANSAYSLELPQQPQQQL
TPGAAASKPGPVDDKPKLELLVQKSSSPGLGQSEPSLERREASASVTAPSPHLDPELPSP
APVLVSPILAPLPVAGPIEQPSAVEPTAPPPSSAADPKHLPLTTQSQTSNTEELLPEAPR
TLAASPALTPKALNGHADTGAEMDTQSQEHYPLAPSLSPTQPQASAPAPREDCSEAVPSV
VRAEMPPAVMDPIAPITVMPVTLTSSPAPAVPAPPPGLPPLVQATAETSKLSDTKDIPLK
AGTERLITPNSKLEPQALFRKSPTTVCQTVPATPKTWKKPNEGSPVGDASQRETEDELKP
VEEAAGDQALQPARPHSSSSPPPPSAAPPAMEAEEKPPAPEENGEAELEPMRNRAGHTSE
TESSDSGATPGDKEGSTGAPPDLFQEDLLETNGKRQYNRDFLLGFQFMAACTQKPDGLPQ
ISDVVLDKINQNKLPTRAVESRVISRGPDFTPAFADFGRQMSGGRGAAVSHAHAHQMMNM
GGGARRPPPRKIILNVSANDEVQLKKAENAWKPGMKRAGPSDDPEVITTQELFRKVRSIL
NKLTPQMFNQLMKQVTDLTIDTEERLKGVIDLVFEKAIDEPGFSVAYGNMCRCLTTLKVP
MTDKPNTTVNFRKLLLNRCQKEFERDKVDDVVFERKQKELDSAQSSDQERLRLELEEAKD
KARRRSIGNIRFIGELFKLKMLTEAIMHDCVVKLLKNHDEESLECLCRLLTTIGKDLDFE
KAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLHNWVSRRADQGPKTIEQIHKEA
KIEEQEEQRKVHQQLLSKDTKRRPEQQQREQQREQQREQRVQQREETWNTVPMTKNSRTI
DPTKIPKISKPQMDEKIQLGPRASLNWMKGSSGGAKASDSELSRSGGGGASLNRYSALQS
TPSQPTTPPAQNPEYDTRRTLGSRSSAGKERSEKPLSSALPRPGSFVRGVSAKELLASPA
LSPEEPRRELESIRRLSVSEDKTEPECSRAREPVKAEPVVAQSPDRPALSEEEMERKSKA
IIDEFLHINDYKEAVQCVNELDLSSQLHVFVRVGVESTLERSQITRDHMGQLLFQLVQQG
TLPKPQFFKGFADTLELADDMAIDIPHIWLYLAELLSPVLRDGGFSMRELFSELSKPLLP
VGRAGVLFSEILHILCKQMSHRKVGTLWRKAGLSWSDFLPEEEDIQDFISQQKLQFTVVD
CSSPEAALSATELSPEVLNRQLERLLLEDMASDEQIFDWVEANLDESQMSSSPFLRALMT
SVCKAAVKDESTSCRVDVAIIQRRLPVLLKYLNSDTERQLQALYALQALIVTLDQPPNLL
RMFFDCLYDEDVISEDAFYKWETSKDPAEQLGKGVALKSVTAFFTWLREAEEESEDN
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccggcgaaaatagtcccaaaacctgccactgtcgcagtaagtggacctgga
actggcccgtctccgtcgagccaactgcgggctaccctgacctcggtgtctttaccgtcg
ggagcaccaggcgctcctcaactgaacaccttgccgcctcctcaaattttccttaatatg
acgcgtcccaggttctctcgggttcagccatccctggatgaccgcatcttccccacacag
cccggtgtcgctgccgtctacagcgtaccgaggcaccctggtcctccctacacagctcac
gactacacaaagggacaccctaacttggcgggcacgccgccaggacatgcccactcgcag
gcgctctctcaggtatcattacccacagcttccccatatcgctaccctaagggctgggag
gcaggtggagtgtctccatacaccactggacagaattctggctcagcacctctagtgtac
tctcctcagacgcagcaaatgaacacgcaaccgcagagtcgcccgtcatccatgcccagc
cccagccccagcccccctgtcatgtggaaccaccagttcgcgacgggccctcgaccaacc
caccatcagggaggattcaggcccatccagtttttccagagggctcagatgcagacagcg
cggccaaccatccccaccaacgctccctctatgcggccctgctctcagaaccccacatcg
gcggtgtacccccccaaccagcccaccatgatgatgatggcccccatgcctttcccctcc
ccacaggctgcccagtactacatcccacagtatcgccacagtacgccctatgtggggccg
ccccagcagttttcagtgcagccgccggggtctggcaccttctatcctggccctagccca
ggggagtaccctgctcagtacgctcctggacctcaatactatccaggacagcaggtgtac
cccccctcaccctccatcatagtgcctacaccgcagcaacctccaccagccaagcgtgag
aagaaaccatcctcccagatccgtatccgggaccccaaccagggcggcagggacatcaca
gaggagatcatggcagggggcacagggagccgaaatccaaccccccctgtcggacggccc
tcctccacccccacccctccgcaacagcagccgggcggtagccagactccggagcaaagc
cagggccaggccaactcagcctacagcctggagctcccccagcagccacagcagcagctc
acacctggggctgcagccagcaagccagggccagtagatgataagccaaaattggagctg
cttgtccagaagtcttcctctcccgggcttggtcaatcagaaccttcattggaaaggcga
gaggccagtgcatctgtaactgctccctctccccacttggatccagagcttccctcccca
gccccagtgttggtttcccccatcctggcccctcttcctgttgccggccctattgagcag
ccctctgccgtggagcccactgctccccctccctcttctgcagcggaccccaagcacctg
ccactcacgactcagtcccagacctcaaacacagaggaacttcttccagaagccccacgc
acccttgctgcttccccagccctaacccctaaggctttgaatggccatgctgacactggg
gctgagatggacacccagtctcaggagcactacccccttgctccctccctatccccaacc
cagccccaggcttcagccccggctcctagagaagactgcagtgaggctgtgcccagtgtg
gtgagggcagagatgccccctgctgtcatggaccctatcgcaccaatcactgtgatgcca
gtcactctgacctccagccctgcgcctgctgttccagcgcctccccctggccttccgccg
ctagtgcaggccacagcagagaccagcaagctctctgacactaaagacatccctctcaaa
gcagggacagagagactcatcacaccaaacagcaagcttgaaccacaagcccttttcaga
aagagtcccactacagtatgtcagactgttcctgctacaccaaaaacctggaagaaacca
aatgaagggagtcctgttggagatgcatcacagagggagactgaggatgagctcaagcct
gtggaggaggctgctggagaccaggccctgcagcccgccaggccccatagtagcagcagc
ccgcccccaccctcagcagcgcctccagccatggaggcagaggagaagccccctgcccca
gaggaaaatggggaggctgagctggagcccatgaggaacagggctgggcacacctcggag
acagagagcagtgacagtggggccacccctggggacaaggagggctctacaggagcaccc
ccagacctcttccaggaagatctgctggagaccaacgggaagcgccagtacaaccgggac
ttcctgctgggcttccagttcatggctgcctgtacacagaagccagacgggctacctcag
atcagtgacgtagttctggacaagataaaccaaaacaagctgccaacccgggcggtggaa
tccagggtgatctctcgtggccctgacttcacacctgccttcgctgactttggcaggcag
atgagtggaggacgcggcgctgcagtgagtcacgcacacgctcaccagatgatgaacatg
ggagggggtgcccggcggcccccgcccaggaagattatcctgaacgtgtcagcgaacgac
gaggtgcagctgaaaaaggccgagaacgcctggaaacctggcatgaagagggcggggcca
tcagacgaccctgaggtcattacaacacaggagctcttccggaaggtgcgcagcatcctc
aacaaactgacgcctcagatgttcaaccagctgatgaagcaggtgacggaccttaccatc
gacacggaggagcgcctcaagggcgtcatcgacctggtctttgagaaggccatcgacgag
cccggcttctctgtggcctacgggaacatgtgccgctgcctcaccacgctcaaagtgccc
atgacagacaaacccaacaccacagtgaacttccgtaagcttctgctcaaccgctgtcag
aaggagtttgagcgggacaaggtggacgacgtggtgtttgagaggaaacagaaggagctc
gactctgcacagtccagtgatcaagagagactacggttggagctggaggaggccaaggac
aaggcccgccggcgctccataggaaacatcagattcatcggggagctgttcaaactcaag
atgctgacagaggccatcatgcacgactgtgtggtcaagctgctgaagaaccatgacgag
gaatcgctggagtgcctgtgcaggctgctcaccaccattggcaaagacctggactttgag
aaggccaagcctcgcatggatcagtatttcaatcaaatggagaaaattgtcaaggagcgg
aagacatcgtctcggatacggtttatgctgcaagacgtgatagatctccgattgcacaac
tgggtgtccaggagagccgaccagggacccaagaccatcgagcagatccacaaagaggcc
aagatcgaagagcaggaggagcagaggaaggtgcaccagcagctgctctccaaggacacc
aagagaaggccagagcagcagcagagagagcagcagagagaacagcagagggagcagcgt
gtgcagcagagagaggagacctggaacactgtgcccatgaccaagaacagcaggaccatt
gacccgaccaagatccccaagatctccaagcctcagatggatgagaagatccaactggga
ccacgggcctcactcaactggatgaagggcagtagtggaggggccaaagccagtgactct
gaattatcccggtctggtggtggtggcgccagtttaaaccggtattctgcactccagtcc
accccatctcaacccaccaccccacctgcacaaaacccagagtatgacactagaagaacc
ttgggcagtcgaagcagtgcagggaaagagcgaagcgagaagcccttgagctcagccctg
ccgcggcctggttccttcgttcgaggcgtcagtgccaaagagctgctggcgagcccggcc
ctgagtcccgaggagccccgcagagagctggagagcatcaggaggctcagcgtcagcgag
gacaagactgagccagagtgcagcagagccagggagcctgtgaaagcagagcctgtggtt
gcccagtctccagacagacctgccctctctgaggaggagatggagaggaagtccaaagct
atcattgacgagttcttgcacatcaacgactataaggaggctgtgcagtgtgtgaacgag
ctggacctgtcctctcagctccacgtgtttgttcgtgtgggggtggagtccaccctggag
cgcagtcagatcacacgggaccacatgggccagctcctcttccagttagtgcagcagggc
accctgcccaagccccagttcttcaaagggtttgctgacacccttgaactggcggacgac
atggccattgacattccccatatctggctgtatctggccgagctgctcagccctgtgctg
agagacgggggcttctctatgagagagctctttagtgaattaagcaaacctttacttcct
gttggaagagctggggtcttattttctgaaatactgcacatactatgcaaacaaatgagc
cataggaaagtaggcaccttgtggagaaaggcgggcctcagctggagtgacttcctgcca
gaggaagaggacatccaggatttcatctcgcaacagaagctccagttcactgtggtggac
tgctctagccctgaggcagccctctctgcgacagaattgtcccccgaggtgctcaaccgg
cagctggagagactcctgctggaggacatggccagtgatgagcagatctttgactgggta
gaggcaaatctagatgaatctcagatgagctcgtctccgttcctgagagctctgatgact
tctgtgtgtaaggcagcggtgaaagatgaaagcacttcctgccgagtggacgtagccatc
atacagaggagattgcccgtattactcaagtaccttaactcagacactgagcgacagctt
caagcactttatgcacttcaggcgctgatagtcacactggatcagcctcctaacctgctc
cggatgttctttgactgtctgtatgacgaggacgtcatctcggaggacgctttttacaag
tgggagaccagcaaggaccccgcggagcagctgggcaaaggtgtggctctcaagtctgta
accgctttcttcacctggctgagggaggccgaggaagagtcggaggataattga
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integrated database retrieval system
