Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371215
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Entry
139371215 CDS
T10872
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139371215
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u5
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Serglycin
Motif
Other DBs
NCBI-GeneID:
139371215
NCBI-ProteinID:
XP_070967507
LinkDB
All DBs
Position
17:complement(60845985..61019749)
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AA seq
1665 aa
AA seq
DB search
MAKVIQKKNHWTTKVNECAVLKDAPGDLNVPLLGGAENGEFAFIGQVNEDIVIYKNGKLT
EGELILEVENLSISGLPLYDVQTVINNCKGPVRLKTVRQGTKLNKDLKHYLSQRFQKSSP
DHELQQTIRDNLYRHAVPCTTRPPRDGEVPGIDYNFLPVEDFLALEQSGTLLEIGAYEGN
YYGTPKPPRQPPSGKVITSDALQDSLPGSQHSTPRRTKSYNEMQNAGIVPVDLEEDEELP
EMNSSLTGDSSEPDEHPYAPRENAPSYGVNNTLSSTTEDSQQTHIHLSHPPTEEDPLGPL
TDNWEMAYTENGELYFIDHNTKTTSWIDPRCLDKPPKPLEECEDDEGVHTEELDSELELP
TGWEKIDDPVYGVYYVDHINRKTQYENPILEAKRLKQLEQQQPPEGERYIREWIEDATLA
GAPLASYTANHQETYRDPQAGPPLPPLIGPKRGKPFFTRNPAELKGTFINTKLRKSHRGF
GFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGYTHAQVVKVFQSI
HIGSMVNLELCRGYPLPFDPDDPNTSMVTSVAIVDKEPIIVNGQDSYDSPSSHGSHTGGP
VNGMRESRPHSPSSAEVASNSSHGYLSDSVTLASSIATQPELITVHMEKGDKGFGFTIAD
SPAGGGQRVKQIVDYPRCRGLKEGDIIVEVNKRNVQSMSHNQVVDMLSKCPKGSEVSMLV
QRGGGVVPAKKSPRLQLARKDSQNSSVSSHRSTHTDSPVHTSLPPPLSKSTAPPPPSQPL
PGLPPQDPQADGTIHRKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGYGFRILGGN
EPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVMGKSHQLVVQLMQQAAKQGHVNL
IVRRKTGYGVSKGEGEVPPSPASSHHSSTQAPSLTEGKRTPQGSQNSLNTVSSGSGSGSG
STSGIGSGGGGGSGSAVVNTALQPYDVEIHRGENEGFGFVIVSSVSRPESGTTFAGNACV
AMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIP
GDDSSNASLLTNAEKIATITTTHTPQQQAAPEPRNNTKPKQESSFEFKSPQAPPPPAPTT
QPPAQDAAFYSVDLERENKGFGFSLRGGHEYNMDLYVLRLAEDGAAIRNGNMSVGDEILE
INGESTKGMKHARAIELIKDGGRHAHLVLKRGDGSVPEYDPSIDGAGPAAGVQNASEVST
LPHNNTPSDTNTPDPHKPSRSKDKKGHHHSKHRHRSPDKKSKSKGGASGETGASSNQSKR
KGDKSKRSGGDNHGTHQHHNNSSGHRHRRHRSPDKGRSRARSAEKTLDSRQSQGHREREG
RSPDRHYTHRQRSPYRSPRRNRSPYGHRSPYGHRSPYGHRSPYHSRHHSPTRYHRTQSSD
PYRQPSPYRLRGREPERPNRGVAPVLRKPPGPVPSPYREESVLREPPALDRLNREATLLR
VPPALDRLNREATLLRESREERLFEEDSLLLRASTLERDYRGDGLLSAAARGQRGETMPR
VHTPESDSAYKRYSSLLRGRSPERVEREARYAPREESPDPRYRVQSLGRNISPVRSFIEL
EEEGATAPRLKESYSTLKSDISRASKAPPEPKRKAYKDSPKDLSI
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtgatccaaaagaagaatcactggaccaccaaagttaacgagtgcgcggtt
ctcaaagacgctccgggtgacttgaatgtgccattgctgggcggtgcagagaacggagag
ttcgccttcatcggacaagttaacgaggatatcgttatttacaaaaatggaaaattaacg
gagggggagttgatattggaagtagagaacctatcgatctctggattgcctctgtatgat
gtacagacagtgataaataattgcaagggtcccgtcagattgaaaacagtcagacaagga
accaagctaaataaggacctgaagcactatctgagccagcgcttccagaagtcctccccg
gaccacgaactgcagcagaccattcgagacaacctctaccgccatgctgtgccttgtaca
acccgccccccacgtgacggagaggtccctggaatagattacaacttcctgcctgtggag
gactttctggctttggagcagagtgggacccttctggaaataggagcatatgaaggtaac
tattatggaacacccaagccgccaaggcagccccctagtgggaaagtgattaccagtgat
gctttgcaagacagcctcccgggctcccagcactccactccccggcgcaccaagtcctac
aatgagatgcaaaatgctggaatagtgcctgtagacctggaggaggacgaggaactcccg
gagatgaacagtagtttaacaggagactcgagtgaacctgacgagcacccctacgccccg
cgtgagaacgccccgtcctacggtgtgaacaacactttgtcatccaccacggaggactct
cagcagacacacatacacctcagccatcctcccacagaagaggaccccctgggacctcta
actgacaactgggagatggcctacaccgagaacggagagctctactttatagaccacaac
acaaaaaccacttcctggatcgacccacgctgcctggacaagcctcccaaacctctggaa
gaatgtgaagatgatgaaggggtacacacagaagagctggacagtgagctagagctgcca
acaggctgggagaaaatagatgacccagtctatggtgtttactatgtggatcacattaac
aggaagacccagtatgagaaccctatattggaggctaagcggctgaagcagctcgagcaa
cagcagccaccagaaggtgagcgctacatccgagaatggatagaggatgccaccctggct
ggtgccccgctggccagctataccgccaaccaccaggagacctacagggatccccaggct
ggacccccactgccgcccctcatcgggcccaaacgagggaagcccttcttcacgcggaac
ccagcagagctaaagggaaccttcatcaacaccaaactgaggaagagccaccgggggttc
ggcttcaccgttgtcgggggcgacgagcctgatgagtttcttcagatcaagagtctggtt
ctggacgggcctgctgccctcgacggcaagatggagacaggtgacgtgatcgtgagtgtc
aatgacacatgcgtgctaggctacacccacgcccaggtggtgaaggtcttccagtccatc
catattggctccatggtcaacctggagctgtgccgcggctacccccttccttttgacccc
gacgacccaaacaccagcatggtgacctccgtggccatcgtggacaaggagcccatcatc
gtcaatggccaggatagctacgactccccgtccagccacggcagccatactgggggcccc
gttaatggcatgagggagtcgagaccacacagtccctcctccgccgaggtggcgtccaac
agctcgcacggttacctcagcgactctgtgacgctggcgtcatccatagcgacgcagccg
gagctgatcacagtgcacatggagaagggagacaaaggctttgggttcaccatcgcagac
agccctgcagggggaggacagagggtcaaacagatagtggactacccccgctgcaggggc
ctgaaggagggggacattatcgtagaggtgaacaagaggaacgtccagagcatgagccac
aaccaagtggtggacatgctcagcaagtgccccaaaggaagtgaggtcagcatgctggtg
cagagaggcggaggggtggtacctgcaaagaagagtccaaggctgcagttagcgaggaag
gacagtcagaacagttctgtgtccagccaccggagtacccacactgactcccctgtgcac
acgtccctgcccccccctctcagcaagagtaccgcccccccacccccttcccagcccctg
cccggcctacctccccaggacccccaggcagacgggaccattcacaggaaaccagacccc
ttcaagatctgggcccagtccaggagcatgtatgaaagtaggctgcctgacttccaggag
caggacatcttcctgtggagaaaggacacgggctacgggttcaggatcctgggagggaac
gagccaggagaaccgatctacataggccacatagtgaagtatggggcggcggatgaggat
ggacgcctgcgttcaggggatgagctcatctgtgtggacggcacggcagtgatgggcaag
tctcaccagctggtggtacagctgatgcagcaggccgccaagcagggtcacgtcaacctc
attgtgcgacgcaagaccggctacggagtgtctaaaggggagggtgaggtgcccccgtcc
ccagcctcatcacaccacagcagcacccaggccccatccttgactgaggggaagcggacc
ccccagggcagtcagaactccctcaacacggtcagctctggcagcggctctggcagcggc
tccaccagcggcatcggtagcgggggcggcggaggctcaggtagtgctgtggtcaacacc
gccctgcagccctacgacgtggagatccaccgcggggagaacgagggctttggattcgtc
atcgtctcctcagtttcccgacctgagtctggcaccacctttgctggaaatgcatgtgtg
gccatgccccacaaaatagggcgtattatcgaggggagccctgcggaccgctgtgggaag
ctgaaggtgggagaccgtatcctggccgtcaacggctgctccatcaccaacaagtcccac
tcggacatcgtcaacctgatcaaggaggccgggaacaccgtcacgctaaggatcattccc
ggagacgactcctctaatgcatcactactgaccaacgctgagaagatcgccactataaca
accactcacacgccccagcaacaggctgcacctgaacccagaaacaacaccaaaccaaaa
caggagtcctcttttgagttcaaatcccctcaggcccctcctccccccgccccaacaaca
caacctccagcccaggatgctgcgttctactcagtggacttggagagggaaaataaaggc
tttgggttcagcctgcgaggaggtcacgagtacaacatggacctgtacgtgctgaggcta
gcagaggacggagcggccatacgcaacggcaacatgagtgtgggagatgagatcctggag
atcaacggtgagagcaccaagggcatgaagcacgcccgcgccattgaactgataaaagat
ggtggccgtcacgcccacctggtcctcaagaggggtgacggctcagtgcctgaatatgac
cccagcatcgacggtgccggcccagccgcaggggtacaaaacgcttcggaagtgagcact
ctgccccacaacaacacaccatcggacaccaacacaccagaccctcacaaaccatcacgg
agcaaggacaagaagggccaccaccattccaaacatagacaccgctccccggacaagaag
agcaagagcaagggaggggcgtctggggagacaggtgcctcctccaatcagtccaagaga
aagggcgacaagagcaagaggtctggtggggataaccacggcactcaccaacaccacaac
aacagtagcggccaccgccaccggagacaccgctcccctgataagggtcgtagccgggcc
cgcagcgcagagaaaaccctggacagtagacaaagccaagggcacagagagagggaaggc
cgctctcctgaccggcactacacccaccgccagcgctctccctacaggtcccctcggcgc
aatcggtcaccctatggccaccgctctccctatggtcaccggtcaccctatggtcaccgg
tcaccctaccactcacgccaccactcccccacccgctaccaccgcacccaatcatcagac
ccctaccggcagccctccccatacagactgaggggccgggagccagagaggcccaacagg
ggggtggcaccagtgctgaggaagcctcctggccctgtgcccagcccctatcgtgaggag
agtgtgctgcgggagcctccagccctggaccggctcaacagggaggccacgctgctgagg
gtgcctccagccctggaccggctcaacagggaggccacgctgctgagggaatccagggag
gagcgcctgtttgaggaggatagccttctgctgagggcatccaccctggagcgtgactac
agaggagatggcctgttatctgctgctgcccgtggccagagaggagagaccatgcccagg
gtccatacccccgagtccgacagcgcctacaagcggtacagctcactgctgaggggccgc
tcgcctgagagggtggagagagaggcacgctacgcccccagagaggagtccccagacccc
cgctacagagttcagagtctgggccgaaacatctcacctgtcaggagcttcatagagctg
gaggaggagggagcaacagcacccaggctgaaggagtcttacagcacactcaagtctgac
atcagccgtgcttccaaagcgcccccggagcccaagcggaaggcttacaaagacagcccc
aaagatctgagcatctga
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integrated database retrieval system
