Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371245
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Entry
139371245 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03022
Basal transcription factors
Brite
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139371245
Coactivators
SAGA/TFTC/STAGA complex
139371245
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
139371245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139371245
NCBI-ProteinID:
XP_070967570
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Position
17:63098463..63112234
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AA seq
950 aa
AA seq
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MAAGSDLLDEVFFNAEVDEKVVRDLVGSLESEFSGHESPEASSQTVAKHMASSGTGFNAN
VQQNKRGLAQEVAKAGAGVQGGVIISNTWSQGSAMDASSSESDSSARHGQGKTVAVSASI
ITPLPNHGGKVASSATQTLNGGSLMNCHNSGSAVSLTGTPLSSSCTSSGNASVAVTVVNN
GPGLSKGHASAVMPPSLNTTITQTSFVNSQNVVTSSHAASLGTGSAISHIVRPSMQTAGS
GTANGPNAGLPFDCLNNGQSPTSVAVSAGSHMIMAEAPKTSIQTASCAVTNPSFQSAPRA
STPVTVAASPGGSRSIAQQVLAPRHPQTSPNQPNVQNIQLPPGMVLVRSESGQLLMIHQQ
TLAQMQSQSQSQGVMAPRPATPTSTPPFQITSVQAPGTPILTRQVTPTTIIKQGSPVPTS
APVTTTLQRPPVLQSPMIVVGAAAGTSMGTALPGATQRTVTASPGTTVTLATETMENVKK
CKNFLSTLIKLASSGKQSSETAANVKDLVKDLLEGKIEVEDFTNRLYRELNSSPQPYLVP
FLKRSLPALRQLTPDSAAFIQHSGLQQQVSATTPTTVVLDSPALRPAAPTIRPHLQPVIS
KQGLTTPMVLQPRQQGAMVRPLQMTPMVTLRGPPPHSHIMLGQPQVQLKQLQTVPVVNPG
VLTGSKSSPVAASLATVVQKNKLKEAGGTFRSAMDDDDINDVASMAGVNLSEESARILAT
NSELVGAVTRSCKDEAFLHTATLTSRILEIGKKFGVSDLGPEVVNYVSHASQTRLQNLLE
KVSEVAQQRNINFKEDSRYEQTSDMRAQIKFFEQLDQMEKQRKEEQEREILMKAAKSRSR
QEDPEQLRLKQKAKEMQQQELFQLRQKEANLTALAAIGPRKKRKMEAAAAAAGAEGSGSS
PAASGSGSSGASRQFIRQRITRVNLRDLLFCLENERDTSHSHLLYKGFLK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggctccgatttgctagatgaggttttctttaacgctgaggtggacgagaaa
gtagttcgtgatcttgtggggtctcttgagtccgagttttcgggtcacgagagccctgag
gcaagtagccagacagtcgctaaacacatggccagttccgggacagggtttaatgctaat
gtccagcagaacaaacggggacttgctcaagaggttgcaaaagcaggggctggagtgcaa
gggggtgtcattattagtaatacgtggtcccagggttcagctatggatgcctcatcaagt
gagtcggactcatcggcacgacacggccaaggaaagaccgttgctgtcagtgccagtata
ataactcctctcccaaaccacggggggaaagtagcctcttccgcaactcaaactttgaat
ggaggcagtttaatgaactgtcacaattcaggaagcgctgtctctctcactgggacaccg
ctgtcaagtagttgcacgagtagcggcaatgcctccgtagctgtcacagttgtcaacaac
gggccggggttgtcaaaaggacatgcgagcgcagtaatgccaccttcattgaacaccact
atcacccagacatcattcgtgaactctcagaatgttgtcacctcgtctcacgctgcgagt
ctgggcactggatctgccatatcacatattgtgaggccatctatgcaaactgcgggatcg
ggtacagcgaatggtcctaatgcgggattgcctttcgattgcctgaacaatggtcagtcg
cccacgtctgtggctgtcagtgcggggtcgcacatgatcatggcagaggcgcccaaaaca
agcatacagactgcttcatgtgctgtaacgaacccgtcgttccagagcgcaccgagggct
tccactccggtgacagtggctgcgagcccgggagggagccgttctatcgcgcaacaggtg
ttggcgcctcggcacccccagacatccccgaaccagcccaacgttcagaacatccagctt
cccccaggtatggtcctggtgcgcagtgagagtgggcagctgttgatgatccaccagcag
accctggctcagatgcagtcccagtcccaatcccagggagtcatggccccccgcccagcc
acccccaccagcactcctcctttccagatcacctcagtccaggctcctggaacgcccatc
ctcactaggcaggtgactcccaccactatcatcaagcagggctcacctgtgccaacctct
gctcctgtcaccaccacactccagaggcctcctgtcctacagagtcccatgatcgtggta
ggggctgctgcaggcacttctatggggacagcgctaccaggggccacccagaggaccgtc
accgcatcacccgggaccactgtcaccttggcaacggagacgatggagaatgtgaagaaa
tgcaagaacttcctgtctacattaatcaagctggcgtccagcgggaagcagtcctcagag
actgccgccaacgttaaagacctggtcaaagatctcctggaagggaagattgaagttgag
gacttcaccaacaggttatacagagagctcaactcctcacctcagccttacctcgtgcct
ttcctcaagaggagccttcctgctctgcggcagctcaccccagactcagcagccttcatc
cagcacagtgggctccagcagcaggtctctgccaccacccctaccactgtggtactggac
agcccagccctgcgccctgcagccccaaccatcagaccacacctccagcctgtcatcagc
aaacaggggctgactaccccaatggtgctccagcctcggcagcagggggcaatggtaagg
cctcttcagatgacccccatggtgaccctcagaggtccgcccccccacagtcacatcatg
ctgggacagccacaggtgcagctcaaacagctacagacagtccctgtagtgaatcctgga
gtgttgactggatctaagtcgtctcctgttgctgcctctctggccactgtagttcagaag
aacaagctgaaggaagctgggggcacgttcaggtcagctatggatgacgatgacatcaat
gatgtggcatctatggctggggttaacctgtctgaggagagtgcccgtatcctggcaacc
aactccgagctggtgggagcggtgacacggtcctgtaaggacgaggccttcctccatacc
gccacactgaccagtagaatactggaaataggtaagaagtttggtgtgagtgatctgggg
ccggaggtagtgaactacgtgtcccacgcctcccagaccaggctgcagaacctgttggag
aaagtctctgaggtggcccagcagaggaacatcaacttcaaggaggacagtcggtacgag
cagacgagcgacatgcgagcccagatcaagttctttgagcagctggatcagatggagaaa
cagaggaaagaggagcaggagagagagattctgatgaaggcagcaaagtctcgttctcgt
caagaagaccctgagcagctgcggttgaaacagaaggccaaagagatgcagcagcaggag
ctgtttcagttgagacagaaggaagctaacctgacggcgctggcagccatcggccccagg
aagaagaggaaaatggaggctgcagccgctgcagctggagctgagggctcagggtccagt
cccgctgcgtctggtagtggtagttcaggagcatccagacagtttatccgccagcgcatc
actcgtgtcaacctcagggacctgctcttctgtttggagaatgagagagacaccagtcat
tcccatctcctctacaaaggcttcctcaaatag
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