Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371260
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Entry
139371260 CDS
T10872
Name
(RefSeq) DNA topoisomerase I, like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocla03032
]
139371260
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139371260
DNA replication proteins [BR:
ocla03032
]
Eukaryotic type
DNA Topoisomerases
139371260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
139371260
NCBI-ProteinID:
XP_070967627
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All DBs
Position
17:64255321..64267156
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AA seq
784 aa
AA seq
DB search
MAVIWRGNTQDRLYQDTISSGGGNSHKHKDKYKDKEHKHKDHKKDREREKSKYGNSDHKE
FSEKKHREKERIKHEDVSTDRHKDKHKEKDHRKDEIKPKKEKENGFASPHRIKTEPDNDH
FYHSPKSLKRQHDNDETEFKPKKIKIENDRVDKKAKKRKQDEVRGNLWVSYWIYFSDPLQ
ERRLMRSLFLVKDIKPKKTQKNKKGEVADGKKKAKKEPEEKWKWWEEERATDGSKWRFLE
HKGPVMAAPYEPLPSKVRFFYDGKQMKLGPEAEEVATFFAKMLDHEYTTKDAFRKNFFKD
WRKEMTSEEKSKITDLKKCNFNEMGEYFKAQSEARKAMTKDDKLKIKVENERLLQEYGFC
IMDNHKERIANFRIEPPGLFRGRGDHPKMGMLKRRIRPEDIIINCSKDSKHPKPPPGTKW
KELRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKAEKDWQKYEIARNLKKCVDRLRNQY
REDWKSKEMRIRQRAVALYFIDKLALRAGNEKEEGESADTVGCCSLRVEHINLYPEKDGQ
EFVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTSILNKHLQELM
DGLTAKVFRTYNASITLQQQLKELTSPDENLPAKILSYNRANRAVAILCNHQRAPPKTFE
KSMQNLQTKIDTKKDQLSDAKRDVKSAKADLKVRRDEKSKKAVETKKKAVERLEEQLMKL
EVQATDREENKQIALGTSKLNYLDPRISVAWCKKWGIPIEKIYNKTQREKFAWAIDMAED
DYEF
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgatatggaggggaaacacgcaggaccgtttgtatcaagacacgatttccagc
ggcggaggaaattctcataagcataaagataagtacaaggataaagaacacaaacacaag
gaccacaagaaggacagggagcgtgagaaatcaaaatatggcaacagtgaccataaggag
ttctcggaaaagaaacacagagaaaaggagcgaataaagcacgaagatgtcagcacagac
agacacaaggacaaacacaaggaaaaagaccacaggaaggatgagatcaagccgaagaag
gaaaaagagaatggctttgccagccctcatcgcattaagacggagccggacaatgatcac
ttctaccattctcccaagtccttgaaaagacagcatgacaatgacgaaactgaattcaag
cccaaaaaaataaaaattgaaaatgacagagtggacaagaaagcaaagaagaggaaacaa
gatgaggtacgtggaaatctttgggtttcatattggatatatttcagtgatccgttgcaa
gaaaggagactcatgcgttctttgtttcttgtaaaggacatcaagcccaaaaagacccaa
aaaaacaagaaaggggaagttgctgacgggaaaaagaaagcaaagaaggagcctgaggag
aagtggaaatggtgggaagaggagagggcaactgacggttccaaatggaggtttctggaa
cataaaggcccagtcatggcagcaccttacgaacctcttcccagcaaagtccgatttttc
tatgatgggaagcagatgaagctcggcccagaggctgaggaggtggccaccttctttgcc
aaaatgctggaccatgagtacactaccaaggatgccttccggaaaaacttcttcaaagac
tggagaaaggaaatgacctcggaggagaagtctaagatcacagacctgaagaagtgtaac
ttcaatgaaatgggggaatacttcaaggctcagtctgaggccagaaaggccatgactaaa
gatgataaactgaaaatcaaagtggagaacgaacgcctcctacaggagtatggcttctgc
atcatggacaatcacaaggagcgcattgctaactttcgcattgagcccccgggcctgttc
cgtggccgaggagaccaccccaagatgggcatgctgaaacgccgcatccgccctgaggac
atcatcataaactgcagcaaggactccaagcaccccaagcctccccctggtaccaaatgg
aaggagttgcgtcatgacaacaaggtgacctggctggtgtcgtggacagagaacatccaa
ggctctatcaagtatatcatgctgaatcccagctcaagaatcaaggcagagaaggactgg
cagaagtatgagatagcccgaaatctgaagaagtgtgtggaccggttaaggaaccagtac
cgcgaggactggaagtccaaagagatgaggatccgacagagagccgtggcactctacttc
atcgataagctggctctgagagcaggtaatgagaaggaggaaggggagtctgcggacaca
gtgggctgctgctccctccgagtggaacacatcaacctgtaccccgagaaggacggccag
gagtttgtggtggagtttgacttcctgggtaaagactccatccgctactacaacaaagtc
cccgtggagaagagggtattcaagaacctgcagctgttcatggaaaacaagcagccagag
gatgacctctttgaccggctcaatacctccattctgaacaagcaccttcaggagctgatg
gacgggctgacggccaaagtgtttcgtacctacaacgcctccatcactctgcagcagcag
ctgaaggagctcaccagcccggatgagaaccttccagccaagatcctgtcatacaacagg
gccaacagagctgtggccatcctgtgtaaccatcagagggcaccgcccaagacctttgag
aagtccatgcagaacctccagactaaaattgacacaaagaaggaccagctatctgacgca
aagagggatgtgaagagcgccaaggctgacctcaaagtacggagagacgagaagtccaaa
aaagctgtggagaccaagaagaaggctgtggagaggctagaagagcagctgatgaagcta
gaggtgcaggcgacagaccgcgaggagaacaagcagattgctctgggcacctccaaactc
aactacttggatccacgcatctctgtggcctggtgcaagaagtggggtatccctatcgag
aagatctacaacaaaactcagcgtgaaaagtttgcctgggctatcgacatggcagaggat
gactatgaattttaa
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