Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371276
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Entry
139371276 CDS
T10872
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139371276
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
139371276
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
YabA
Oscp1
DUF6809
Motif
Other DBs
NCBI-GeneID:
139371276
NCBI-ProteinID:
XP_070967661
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Position
17:complement(65139370..65143243)
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AA seq
398 aa
AA seq
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MERITSAQPPPCMAKHQSQEMADMQGKDFPKYVCKHRKGMKRVEDSKETYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALSTLLEQQQQKIIAFQI
RDQSSVSSENSEEMFHSGFHVCAKEVLQYLANQGSSRDPLTPSEMISHLHKVASEVLQGP
FSPQSEEPTHKPIDSMEKPAGQMPKGKEGHPKNFVSVIQRTYPHGHGEQSGNDTDTDSGY
GGEHEKRDLKAQRSSYYSKEGELKYALAERMAGGGVKQEGAEPQAKRLKSDYSEDESSSG
QVVSSHHSYMSFSQHQTPLCVPFYLIPQAAASWPMMEKCWFPGGMPFLYPGMNVSAASLS
PEKIPKNLVMSPRAGSPTLYQAPMDSPALLQALKQAPP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattacaagtgcgcaacctcctccttgtatggcaaaacaccagtcgcaggag
atggcagacatgcaaggaaaagatttcccaaagtacgtgtgcaaacaccgaaagggaatg
aagcgcgtggaagacagtaaggagacatacaagttaccccaccgattgattgagaagaaa
agacgtgacagaatcaatgaatgcattgcccaactgaaggatttattgccagaacatctc
aaactcacaactctaggccatttggagaaagctgtggtgttggaactcaccctgaagcat
gtgaaagccctgagcactctcctggaacagcagcagcagaaaatcattgcatttcaaatc
agggatcagagcagtgttagctcagagaacagtgaggagatgttccactctggcttccat
gtctgtgctaaggaggtcctccagtacctggctaaccaggggagcagcagagaccccctg
accccctctgaaatgatcagccacctccacaaagtagcatcagaggtgctccagggtcca
ttcagcccccagtccgaagaacccacccacaaacccatcgatagcatggagaagcctgct
ggtcagatgcctaagggcaaggagggtcaccccaagaactttgtgtctgtcattcaaagg
acatacccccacggacatggagagcagagtggcaatgacacagacactgacagcggctat
ggaggggaacacgagaaacgggacctcaaagcccaacgctcaagctactacagcaaggag
ggggagctcaaatatgctctggctgagaggatggcaggaggtggcgtcaagcaggagggt
gctgagccccaggccaagaggttaaaatctgactactcagaggacgagtcttcctctggg
caggtggttagcagccatcacagctacatgagcttctcccaacaccagacccccctctgc
gtgcccttctacctcatccctcaagcagctgcatcgtggcccatgatggagaagtgctgg
ttcccagggggcatgccctttttgtacccgggcatgaatgtctcagcagccagcttgtct
ccagagaaaatacctaaaaacttagtaatgtctcccagggcaggttccccgacactctac
caagcacccatggactcaccagccctccttcaagctttaaaacaagcccccccatga
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