Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371295
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Entry
139371295 CDS
T10872
Name
(RefSeq) contactin-4-like
KO
K06761
contactin 3/4/5/6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139371295
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
139371295
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Contactins
139371295
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ocla00537
]
Others
139371295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_C17orf99
V-set_CD47
Tissue_fac
C2-set
Pur_ac_phosph_N
C2-set_2
Motif
Other DBs
NCBI-GeneID:
139371295
NCBI-ProteinID:
XP_070967699
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All DBs
Position
17:67120065..67347971
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AA seq
1029 aa
AA seq
DB search
MMLLWKLLVLKSLMGCLAESSVLQSPVFTKQPGSIVFPVDSQENNRDVVFSCEAQGSPSP
LYRWKLNGTAITPKSGSHYSLSGGNLRISHLNKDQDAGTYQCLASNSFGTIVSREASLTF
AYLGNFKTNRRNSVSVREGQGVVLLCGPPSHSGDLTFSWIFNEYPSFVKQDTRRFISQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGIMGEYEPKIEVQFPEIVH
VAKGLTVKLECFALGNPVPSINWSRVDGIPFSRKVDVGKASGVLEIPYFQQEDAGTYECV
AENSRGKNTVKGKLSFYAPPHLIEKPEDVQKPIDDSLVWECKATGKPKPSYRWMKNGENL
ESLEERIQVANGALSISRLTLSDIGMYQCVAGNKHGEVYSNAELRVIAVAPDFSQNQLRS
PTMVKEGGDVLIECRPKMSPWGVISWRKGSEALRESHRVSILDNGNLRIQNSTRPDAGLY
TCVARNQFGVASSSGTLMVKEPTIITTAPSTLDVTVGESIVLPCQVTHDPSLKLMFTWFF
NEQLIHFGDHGGYFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAADLVVRG
PPGPPTSIHVEEISDTTASLSWRPGPDNHSPITTYTIQARTPFSLGWQAVTTVPEVVGGR
SLTATVIDLSPWVEYEFRVLASNAIGTGEPSKPSKQARTKETSPKVTPANVSGGGGSRSE
LVITWEPVPEELQNGGGFGYVVAFRPSGATGWMQAAVPSSEASKYVFKNESIQPFSPFQV
KVGVYNNEGEGPFGPVITIYSAEEEPGRAPTRIRAKSLSASEIEVSWKALPWNTSKRRVL
GYELRYWEKREKEEAASVQRTVGNQTSAIIRGVRGSNTYYVTVRAYNTAGAGPPSVTVNV
TTKKPPPSQPPVKVMWNTLNSKIILNWEQVKALENESEVTGYKVLYKRNRHSRPSVMETN
TTTVELSLPMNEEYFIQIKPFGEGGEGSSSRQITIPRIPGPNAIGSATKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctggtgctgaagtcactcatggggtgcctggcagagagc
agtgtcctgcagagcccagtgttcaccaagcagcctggcagcattgtgtttcctgttgac
tcccaggaaaacaacagagacgtggtgttcagctgtgaggcccagggaagcccatctccc
ctttatcggtggaaactgaatggcaccgcgatcactcccaaatcaggctcacactatagc
ctgtctggaggcaacctccgaatcagccatttaaacaaagaccaagatgctggaacatat
cagtgcctcgcctccaactcttttgggaccattgtgagccgagaggccagtctaaccttt
gcatacttggggaacttcaagaccaaccgaagaaactcagtgtcagttcgcgagggacag
ggggtggtgctgttgtgtggtcccccatctcactctggagatctgacattctcctggatt
tttaatgagtatccctcgtttgtgaagcaggacacacgacgctttatctcccaggagacg
ggcaatctatacatcgctaaagtggagccttctgatgtgggcaactacacctgtgtggtg
accaatactgtcaccaaaaccagagtccagggcccgcccacgcctttggtgctccgcagt
gatggtataatgggtgaatacgagccgaagatcgaagttcagtttccagagattgtccat
gtagccaaaggattgacagtgaaactggaatgttttgcattaggaaaccctgtcccctct
ataaactggagtagagtggacggaatccccttttctaggaaagtggacgtggggaaagcc
agcggcgtcctggaaatcccttatttccagcaggaagacgcgggcacatatgagtgtgtg
gcagagaactccagggggaagaacactgtaaaaggaaagctctcattctacgcccctcca
catctgatagagaaacctgaggatgtgcagaagcccattgacgactctctggtgtgggaa
tgcaaggccaccgggaagcccaagccctcctataggtggatgaagaacggagagaacctg
gagtcactggaggagcgcatacaagttgccaatggagcgttgtcaatcagccggctgacg
ctgtccgacattggaatgtatcaatgtgtggctggaaacaaacatggggaggtatactcc
aatgcagagctcagagtcattgctgttgccccagatttctcccagaaccagctgaggagc
cccaccatggtgaaggagggaggagacgtgctgatcgagtgccggcccaagatgtccccc
tggggcgtgatctcctggaggaagggcagcgaggctcttcgagagagccacagagtttcc
attctggataacggaaacctccggatacagaattcaaccagaccagatgcaggcctttac
acgtgtgtggcaagaaaccagtttggagtggcaagcagctccgggactctcatggtcaaa
gagccgaccattatcacaacggcaccgtccaccctggacgtgactgtaggagagagcatc
gtgctgccgtgtcaggtgactcatgacccgtctctgaagctcatgttcacctggttcttc
aacgagcagctgatccactttggcgaccacggcggatactttgaaaaagtgggcggtcag
cattccgctggggacatcatgattcggaacatccagctgagacacgcagggaagtacacc
tgtgcagtgcagaccaaggtggacagtatctccatcgcagcagacctggtggtccgaggt
cccccaggcccacctaccagcatccatgtagaagaaatcagtgacaccacagcctctctc
tcctggagaccggggcctgataatcacagtccaattaccacatacactatccaggccagg
acacccttctccctgggctggcaggctgtcaccacagttcctgaggtggtggggggccgc
agtctgacagctacagtaatagacctgagcccctgggtggaatatgagttcagagtcctg
gcaagcaacgccattgggaccggggagcccagcaaaccatccaaacaagcaaggacaaag
gagacatctccgaaggtcacaccagctaatgtgagcggaggtggaggcagtcgctcagaa
ttagtcatcacttgggagcctgttcctgaggagctgcagaacggaggagggtttggctat
gtggtggccttcagaccgtccggagccacaggctggatgcaggctgccgtgccctcatca
gaagcctccaaatatgtctttaagaacgagagcatccagcccttctcccccttccaagtg
aaggttggagtgtacaacaacgagggggaaggccctttcggacccgtcatcaccatctac
tctgcagaggaagagcctggcagagcgcccaccaggatccgtgccaagagtctgtctgcg
tctgagattgaggtttcatggaaagccctgccttggaacaccagcaagagaagagttcta
ggctatgagttgaggtactgggagaagagagaaaaggaggaggcagccagtgtccagagg
acggtagggaaccagacgtcagccattatccgaggggtgagaggaagtaacacttactac
gtcacagtgagagcgtacaacacggccggggctgggcctcctagtgtcactgtcaatgtc
accaccaagaaaccaccgcccagccagcccccggtgaaagtgatgtggaacacattgaat
tccaagataatcctgaactgggagcaagtcaaggccctggaaaatgagtcagaggtcact
ggctacaaagtgctctacaagcgtaaccgacacagccgccctagtgtcatggaaaccaac
acaacgacggtggagctctccctgcctatgaatgaggagtacttcatccagatcaaacca
tttggggaaggaggagaggggagcagtagcagacagatcaccatccccagaataccaggt
cccaatgcaattggctcggcgaccaaggtctctactttatcagccctcagtacaatagca
ttgtctttcacagcgcgaacatcgttatga
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