Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371308
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Entry
139371308 CDS
T10872
Name
(RefSeq) PR domain zinc finger protein 2-like isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00310
Lysine degradation
ocla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
139371308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139371308
03036 Chromosome and associated proteins [BR:
ocla03036
]
139371308
Enzymes [BR:
ocla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
139371308
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
139371308
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
139371308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-C2HE
zf-C2HC_2
zf-C2H2_3rep
zf-C2H2_11
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
139371308
NCBI-ProteinID:
XP_070967725
LinkDB
All DBs
Position
17:68434402..68444252
Genome browser
AA seq
1592 aa
AA seq
DB search
MSVLGINKARKLLERARQACLGGFRGPKQTGGTKPIVTEMWDTEEGPNEEDERPSPSPGP
SQGTRESSTMGSNSLSQAQFISAAMREKDEEGDEEDPRDLQQRPSQSARSATEAESEDRC
EQPDLPLSHSSPGEVGPGSLQTASSLPRPEPEADPYLDPDLEGDPHGEESHPCQHCERHF
STKQGLERHTHIHATANQQTHTFKCRYCGKSFGSQVGRRRHERRHENGPKNKGQRPGSLA
GTATLLSPLGQADCSSPDCATVSGHYVVMGSPPPGGLMQSPQVVRKDPAAESDQPFIVDE
NGETKELHPCKYCNKAFGTHTNMRRHQRRIHERHLLPKGVRRKGMLLQESPQQQQQQRLP
EQSPSASPPPVYVPSADTEDEGDREEYMVDISNNISENLSLYIDGKILSTSSVSGCEVIE
VDSSSAALFGLDAVVISPNQISQAFKVDTRTCAVKQVSNLGQPTTKRRTSTPPLMPSLKM
ESENGSSSASSSSTSSSSTLLVESLFPQSSDSLAFQKEKTIYLSPKLKQLLQTQTDGQKP
TIALIADSHRLAPPLSVTSLPAASGRFKRRTASPPSSPQLSPALKADGCKSEGGVSSYTL
KVPKLESLGISSAWSLSSKEERNTMSPSGKDGCSWSASRTGGNSCNQQPLDLSSGISKWS
DGFNKTPREEVLDLSMSRKSTAEPESKGSPAPTQPHTKKKKPNTSMLEKVLMNEYAGLNP
AGEEGSCALGSPDSQYTASSGTGTASHSPSSNMPFESADPSPPSLTPVTMNPSSPCVSSM
TSPTPPPPVLPSMPSSDCPTSSSLPVLSPKMSPRSIDHCEDEPVCVSNSTTAETILAAVS
NSYGDVTKPVDPTHNTDPVIGKALSNPSTESPSVSDAVPVSLSSAQSKPARSGNHIFLDI
QINPDLEPIITEGQGKSQCSELPVLSPVTESPLTASSTSPVGISDVPAPSVVSPASLSST
VIKEEVQHMDQLADLGLPPGATGSSPPSATAAEKPSEEVVEEEGLEPDPFSKSFVCNVCE
DPFRSIKELSRHIVEHAAEWPYRCEFCVQLFGNAPALLEHRTALHGVGRIFVCSFCSKEF
AFLCNLQQHHKDLHPSQPCTHAAVESGKLRPQNYTDPARAKEESNPSTTGPESSAEAASS
QGVSDVKKEQLDTNGKHEEAGPEDPTEELYTTIKIMASEGGKPKGPDVRLGINQHYPSFK
PPPFPYHNRTAADSVASATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANAS
DKRRYTPKKNPIPLRQIVKPQNGALSPASAANAGHNAFRRMGQPKRLNFNQEPLGKTKMS
SLSKKKNQLVQKAITQRNKTAATAKAPSQVKEEEPQEVHVCPHCSREFTYPASLSKHIAV
SCPMKPVSKKAKKGAAAEEATPAVDKNMSLRRRTTDSEIQQPETAEPVPKTLGKTRARTS
GPGSAEAETTPRPGKGKTAVTQVRTKRPASFPAATVSLNMKSKKGKVQSLPPTPLPSETP
SNSAPLPATQTKQRTGKEMPPKKVAEVKLPLQKPSQVPPKKEGERFSLRARERAGGPVTR
SLQMANNVAPVEVKTEDLSSQGPKETQESLLK
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcttggcatcaacaaagccagaaaactgttggaaagagccagacaggcttgt
ttgggtggattccgtgggcccaaacaaacaggcggaaccaaacctattgtcacagagatg
tgggatacagaggaaggtccaaatgaggaggacgagagaccctctccttctccagggcct
tcacaggggactcgggagagctccaccatggggagtaacagcctctctcaagcccagttc
atctcagcagcaatgagagagaaagatgaggagggtgatgaggaagacccaagggatctg
cagcagcggccgtcgcagagtgctcggtctgctactgaagctgaatcggaggataggtgt
gagcagcctgatctgccactaagccatagcagcccaggtgaggtggggcctgggagcctt
cagactgcctcatccctaccaaggcctgaaccagaggctgacccatacctcgaccctgac
cttgaaggtgacccccacggagaggagtcccatccctgccagcactgcgagcgccatttc
tccaccaaacagggcttggagcgccacacccacatccatgccactgcaaaccagcaaacg
cacacgttcaaatgccgttactgtggcaagtcctttggctcgcaggtgggacgtcggcgg
cacgagcggaggcatgagaacgggccaaagaacaaaggccaaaggcctggctcactggct
gggactgctactttactcagtcctctggggcaggctgactgttccagcccagactgtgcc
actgtctctggccactacgttgtcatggggtccccgccccctggaggacttatgcagagc
cctcaggttgtgaggaaggaccctgcggctgagagtgaccagccctttatcgtggatgag
aatggagagacaaaagagcttcatccttgcaagtactgtaataaggctttcggcactcac
actaacatgcgcagacaccaacgcagaatccacgagcgccacttactgcccaagggtgtg
cgcaggaaaggcatgctgctgcaggagagcccgcaacagcagcagcagcagcgtctgcct
gagcagtcccccagtgccagcccaccccctgtctatgtgcccagtgcagacactgaggat
gagggggaccgagaggagtacatggtcgacatatccaataatatctcggagaatctcagc
ctgtacatcgacggcaagatcctgtccactagttcagtcagcggctgtgaggtgatcgaa
gtggactccagttctgcagcactgtttggtctcgatgcagtggtcatcagccccaatcag
atcagtcaggctttcaaagtggacaccaggacctgtgctgtgaagcaggtctccaacctc
ggccagcccacaacgaaaaggagaacgtcgacacctccgctcatgcccagtcttaaaatg
gagtctgaaaatgggtcctcctctgcctcttcctcctccacgtcttcctcatctaccttg
ttggtggaaagtctcttccctcagtcctcagactcattagcatttcaaaaggagaaaact
atctatctgtctcctaagctcaaacagctcctccagactcagacagacggtcagaaaccc
accatcgccctgatagcagacagccacagattagctccccctctctccgttacgtctctg
cctgcagcctcaggcaggtttaagagaagaacggcttcccctccctcgtctccacagctc
agccctgcgctgaaagcagatggctgtaagagcgagggaggggtctcgtcgtacaccctc
aaggtgccaaagctggagagcctgggcatttcctctgcctggagtctgtccagcaaagag
gagaggaacaccatgagtcccagcgggaaggacgggtgcagctggtctgcctctcggacc
ggagggaactcgtgtaatcagcagcccttggacctttccagtggcatcagtaaatggagt
gacggcttcaacaagacgcccagggaggaagtgctggatttaagcatgagtcggaagagt
acagcggagccagagtccaagggaagtccagctccgacacagccccacaccaagaagaag
aagcccaataccagtatgctggagaaggtgttgatgaatgagtacgctggcttaaaccca
gcaggagaggagggctcttgtgccctgggaagccccgattctcagtatactgcaagcagt
ggtacaggcacagcttctcacagtccctcttccaatatgccctttgaatcagccgatcct
tctcccccctctctaacccctgtcactatgaatccctcttccccctgcgtctccagcatg
acctctccaactccacctccccctgtcctaccctctatgccctcatcagactgccccact
tccagctctctccctgtcctctcccctaaaatgtcccccagatccattgaccattgtgag
gacgagccagtttgtgtatctaactctactacagcagagacaatattagctgcggtaagt
aacagttatggagatgtcactaagccagtagaccccacccacaatacagatcccgttatc
gggaaagctttatcaaacccctctacagagtccccctcagtatctgatgctgtccctgtg
agtctgtcctcagcacaatctaaacctgctaggagtgggaaccacattttcttagatatc
caaattaacccagacctggaaccgattattactgagggacaggggaaatcccaatgctct
gaactccctgttttatcacccgtaacagaatcccccctcactgcctcatcgacctctcct
gttggaatatcagatgtcccagctccgtcagtggtctccccagcatcactctctagcact
gtgattaaagaggaggtccagcacatggatcagctggctgatttaggccttcctcctggt
gccacagggtcttcacctccatctgccactgctgctgaaaagccctctgaggaggtggtg
gaggaggagggattggagccagaccccttcagtaagagctttgtgtgtaacgtgtgtgag
gatcccttccgctccatcaaagagctcagtcggcacatcgtggagcacgcggctgagtgg
ccctacaggtgtgagttctgtgtgcagctgtttgggaatgccccggccctgctggagcac
cgtacagccctccatggtgtgggacgcatctttgtctgctccttctgctccaaggagttc
gccttcctctgcaacctccagcagcaccacaaagacctgcatcccagccagccgtgcaca
cacgcagcggtggagagtggcaagctgaggccacagaactacacagacccagccagggcc
aaagaggagagtaacccctcaaccacagggcctgagtcctctgctgaagctgcctcctcc
cagggggtttctgatgtgaagaaagagcagcttgatactaacgggaagcatgaggaggct
ggaccagaggacccaactgaagagctctatactacaataaagatcatggcttctgaagga
ggcaagcctaaaggcccagacgtacgcctgggcattaatcaacactaccccagtttcaag
ccaccccccttcccctaccacaaccgcacggctgcagactcagtggcctcggccaccaac
ttcactacccacaacattccccagacgttcagcactgccatccgatgcaccaaatgcggc
aagagctttgataacatgcccgagctgcacaagcacatactagcctgtgccaacgccagt
gataagaggcggtacactcccaagaagaaccccatccctctcagacagatagtgaagcct
cagaacggagctctgtcgcctgcctctgctgccaacgcagggcacaacgccttccgcaga
atgggccaacccaagaggctgaacttcaaccaagaaccgcttggcaaaaccaagatgagt
tccctcagtaagaagaagaaccagctggttcagaaggccatcactcagaggaataagact
gctgctactgctaaggcccctagccaggttaaagaggaggagccacaggaggtccatgtg
tgccctcactgcagtcgggagttcacttaccctgcaagcctcagtaaacatatagcagtc
agctgtcccatgaagcctgtctctaaaaaggccaaaaagggagcagcagcagaagaggca
acaccagctgtagacaaaaacatgagccttcgaaggagaaccactgactctgagatccag
cagccagagaccgctgagccggtgcccaaaaccctgggcaaaacacgcgctcgcacctct
ggacccggctctgcggaggcagagaccacaccgcggccaggtaaaggaaagacagctgtc
acacaggtgcgtacgaagaggccagcctctttccctgctgccacagtttctctcaacatg
aaaagtaaaaaaggcaaagttcaatcattaccccccaccccgttgccctctgagactccc
agtaactctgcaccactgccagcaacccagacaaagcaacgcacaggcaaggaaatgccg
cccaagaaggtagcagaggtgaaattgcccctacagaagccgtctcaggtgccgcctaag
aaagaaggggaacggttctctctgagagcgagggagcgagctggtgggccggtgacccgg
agcctacagatggccaacaatgtagctcctgtggaggtgaaaacagaggacctctccagc
caggggcctaaagagacccaggagtccttgctgaaatga
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integrated database retrieval system
