Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371327
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Entry
139371327 CDS
T10872
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139371327
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139371327
04261 Adrenergic signaling in cardiomyocytes
139371327
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139371327
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139371327
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
dCache_2
Motif
Other DBs
NCBI-GeneID:
139371327
NCBI-ProteinID:
XP_070967757
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Position
17:69096203..69375674
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AA seq
1112 aa
AA seq
DB search
MAICAQSYGIFCLFSIQTILIISLSSPATGSLRFPQHYTMMHWAGRIEKELEKTIQLVTG
TQQIRSIYNEKKSQFDIKRNNPKDLVERVARDIAKLLTSKRRALERLAREAEQLQTDFPW
LDSIKESDMEYYDSKAESDYTEDGDGEENLMENPYSMKLEFVDDPNFKNKVNYSYSAVQI
PTDIYKGSPVILNELNWTQALERVFIDNRREDSSLRWQVFGSATGVTRYYPATPWRAPNK
IDLYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVMEMLDTLSDDDYVNVA
RFNEKADAVVPCFKTLVQANMRNKKIFKESIMHMQAKGTTDYKSGFQFAFEQLLNDTGAP
RAGCNKMIMMFTDGGEDRAQDIFEKYNWPNKTIRVFTFSVGQHNYDVTPLQWIACANKGF
YYEIPSIGAIRINTQEYLDVLGRPMVLAGPKAKQVQWTNVYQDALGLGLVITGTMPVFNL
TADANSQTQLVLGVMGVDVAINEIKRKTPTYRLGANGYTFAIDQNGYLLLHPNLQPKIIN
FREPVTLDFLDAELEDSKKEEIRREMIDGKSGQKKIKTLIKSVDERYIDEAMRTYTWTPV
EGTDYSLGLVLPTYSENHIKANLSDQILQVQYFESLLPNSFESEGHVFIAPREYCNELEL
SNNNTEFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVEKVWKTKDLTTYGFLA
VFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYRTVNDELLNPEN
DTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAWVDKFKILASNQTSPTSDNRQVQQTCG
PTSGCEMDCEANSEDLLCYLVDDGGFLIMSNQKDHWNKIGMFFSEVDPYLMHALYNNSFY
NRKQSFDYQSVCDPVPSSNTGAAPRGVFVPTIADFVNLAWWSSAAAWSLFQQLLYGMAYH
SWFVTDEVEAEGMDSRETSCVTIQTQFYFTNINSSYDILQDCGNCSRLIHAKRLNNTNLL
FVVAEKMPCNTCEVEKLSQAETEFKEDNPSCEDMSAARYRKGPAVCYDYNLSENTSDCGR
GHSFHPSLQTLLMIQLFLLYPIASPHILPLLL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagtcctacggtatattctgtctgttctcaatccaaactatcctc
atcattagcttatcttcgccggcaacggggagcctccgcttcccccaacactacacaatg
atgcattgggcaggccgcattgagaaggagctggagaagactatacagttggtcactgga
acccagcagataagatcgatttacaatgagaagaagagtcagtttgacatcaagaggaac
aatcccaaggacctggtggagagggtggcacgagacatcgccaagctgctcactagcaag
aggagagccctggagaggctggccagggaggcggagcagctgcagacagattttccctgg
ctggacagtatcaaggagagcgacatggagtactatgattcgaaagcggaatcagactat
acggaggatggagatggggaagagaacctgatggagaacccctactccatgaagctggag
tttgtggacgatcccaactttaaaaacaaggtcaactactcctacagcgccgtccagatc
cccacagacatctataagggctcaccagtcatcctgaatgagctgaactggacccaggct
ctggagagggtattcattgataaccgccgggaggacagctctctgcgctggcaggtgttc
ggcagcgccacgggggtcacaagatattacccagccactccatggagagcacccaataag
attgacctgtatgacgtccgcaggcggccatggtacatccaaggggcatcatctcccaag
gacatggtcatcatcgtggacgtgagcggcagtgtcagtggactcactctgaaactgatg
aagacgtcggtcatggagatgctagacactctgtcagatgacgactatgtgaatgtagcc
aggtttaacgagaaggctgatgctgtcgtcccctgttttaagaccttggtccaggccaac
atgagaaacaagaagatcttcaaggagtctatcatgcacatgcaagccaaaggaaccact
gactacaagtctggcttccagttcgccttcgaacagctactcaatgataccggcgcccca
agggcgggctgcaataagatgataatgatgtttacagatggaggagaggatcgtgcacag
gacatctttgagaagtacaactggcccaacaaaacaattcgagtatttaccttttcagtt
gggcagcacaactatgatgtcacccccttgcagtggatagcttgtgccaacaaaggattc
tactatgagattccatccattggagccatcagaattaacacacaggagtacctggatgtg
ctgggtcggcccatggtgctggctgggcccaaggccaagcaggtccaatggaccaatgtc
taccaggatgctctgggtctgggtctggtcataactgggaccatgccagtcttcaacctc
accgctgatgcaaattctcagacgcagcttgtccttggtgtcatgggggtggatgttgca
atcaacgaaattaagaggaagacaccaacatacaggcttggagccaatggatacaccttt
gcgatcgaccaaaatggctatttgctcctgcaccccaacctgcaacctaagatcattaac
ttcagagaacctgtcaccctggacttcctggatgctgagctagaggacagtaaaaaggag
gagatccgtcgagaaatgattgatggcaaatcagggcaaaagaaaatcaagactctaatt
aagtcagttgatgagaggtacattgatgaggccatgcggacatatacctggacaccagtg
gagggcacagattacagtctagggctggtactgcccacatacagtgagaaccacatcaag
gctaacctgagtgaccagatcctgcaggtgcagtattttgaatctctgctgccaaacagt
tttgagtctgaaggacatgtattcatagctcccagggaatactgcaacgagctagagctc
tccaacaacaacactgagttcctgctcaacttcatcgctctcatggagaaggtgacacct
gactccaaacaatgtgacaacctgctccttcataacctcatcctcgacactggcatcatc
agacagctggtggagaaggtgtggaagaccaaagacctcaccacctatggctttctggca
gtgtttgctgcaacagacggagggattacaagagtgtttcccaacaaggctgctgagacc
tgggaagaggaccctgagccttttaatgccagctattaccgccgcagtctggacaacaag
ggctacatcttcagagcgccttatcgcaccgtgaatgatgagctgctgaacccagagaac
gacaccataggaatcctggtcagcactgcagtggagatcacagtgggagggaaaaccatc
aaacctgcagtggttggcgtaaagctggaccttgaggcctgggtggacaaattcaagatc
ctggctagtaaccaaacaagtccaacaagtgacaaccgccaagtccaacaaacgtgtgga
ccaaccagtggctgtgagatggactgtgaagccaacagcgaagaccttctttgttacctg
gtggatgacggtggtttcctgatcatgtccaatcagaaggatcactggaacaagattggc
atgttcttcagtgaggtggacccctacctgatgcatgctctctacaacaactccttttac
aaccgaaagcagtcctttgactaccagtctgtgtgtgaccccgtgccaagcagcaacacc
ggagctgcaccaagaggagtctttgtgcccaccattgcagactttgtgaacctggcctgg
tggtcatcagcagctgcctggtccctatttcagcagctgctctatggaatggcctaccac
agttggtttgtcacagatgaggtggaggcagaggggatggactccagagagaccagctgt
gtgacgatacagactcagttctacttcactaacatcaacagctcctatgacatcctgcaa
gactgtggcaactgttccaggctgatccatgccaagaggttaaacaacaccaacctgctg
tttgtggtggcagagaagatgccctgcaacacctgtgaggtggagaaactgtcccaggcg
gagacagagttcaaggaggataacccatcatgtgaggacatgagtgcagcgaggtatcga
aaagggcccgctgtatgctacgactacaatctatctgagaacacatcagactgtgggcgg
ggccactccttccacccttcactccagaccctgctcatgattcagctcttcctcctctat
ccaatcgccagccctcatattctgccccttttactttaa
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