Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371368
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Entry
139371368 CDS
T10872
Name
(RefSeq) transcriptional enhancer factor TEF-5-like isoform X1
KO
K09448
transcriptional enhancer factor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139371368
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
TEA domain
139371368
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YBD
TEA
Motif
Other DBs
NCBI-GeneID:
139371368
NCBI-ProteinID:
XP_070967824
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All DBs
Position
17:71884273..71956352
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AA seq
426 aa
AA seq
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MDGDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRT
RKQVSSHLQVLARRKSREIQSKLKAMNLDQASKDKALQNMAALSSAQIVSPSLIKSQLPP
LPHSPYPPQARFWPGPIPGQPGPSQELILELNQGRTPGFGRTSYAIKPFAPSPYTTLPGP
PPPPISNYEPLAPPLPPAATAVPVWQDRTIASSKLRMLEYSAFMEVQRDPDNYSKHLFVH
IGQTNPSYSDPLLEAVDIRQIYDKFPEKKGGLKELYEKGPQNAFFLVKFWADLNSSGMQD
GPGSFYGVSSQYSSSENMTITVSTKVCSFGKQVVEKVETEYARMEGGKSVYRIHRSPMCE
YMINFIHKLKHLPEKYMMNSVLENFTILQVVTDRDTQETLLCIAFVFEVSTSEHGAQYHV
YRLVKD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggatggggacgccgagggggtgtggagcccagacatagagcagagcttccaggaggcc
ctggccatctaccctccctgtggacggaggaagatcatcctctcagatgaaggcaagatg
tatggtcgtaatgagttgatagctagatacatcaagctgaggacaggcaaaacccgcacc
agaaaacaggtttctagccatttgcaggttctcgcccggagaaaatctcgcgagatccag
tcaaagctgaaggccatgaatttggaccaggcatctaaagacaaggccctccagaacatg
gcagcgttgtcgtctgctcagattgtttctccgagcctgatcaagagccagctaccccca
ctgccccactctccctaccccccgcaagccaggttttggccaggccctatcccaggacaa
cccggcccctctcaggagctgattctagagctcaaccagggaaggactcctgggtttggc
cgcaccagctatgctatcaaaccttttgcaccgtctccatacacaactctaccaggccct
ccccctccccctatatcaaactatgagcctttggcaccccccctccccccggctgctacg
gcggtgcccgtgtggcaggaccggaccatcgcctcctccaagctgcggatgctagagtac
tctgccttcatggaggtgcagagggaccctgacaactacagcaaacacctgtttgtccac
attggccagaccaacccgtcctacagcgaccctctgctggaggcagtggacatcaggcag
atctacgacaagttcccagagaagaagggcggactcaaagagctttatgagaaaggccca
cagaacgcctttttcctagtcaaattttgggcggatctcaacagcagtggcatgcaggac
ggcccaggctccttctacggagtcagcagccaatacagcagctctgagaacatgaccatc
accgtctccaccaaagtctgctccttcggcaaacaggtggtcgagaaagtagagacggag
tacgcccggatggagggagggaagagtgtctacaggatccaccgctctcccatgtgcgag
tacatgatcaacttcatccacaagctcaaacacctgccagaaaaatacatgatgaacagt
gttctggaaaacttcactatacttcaggtggtgacagaccgtgacactcaggagaccttg
ctgtgtatagcgtttgtgttcgaggtctcaacgagtgaacacggggcacagtaccacgtc
tacaggctcgtaaaagactga
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