Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371413
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Entry
139371413 CDS
T10872
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03013
Nucleocytoplasmic transport
ocla03015
mRNA surveillance pathway
Brite
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139371413
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139371413
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139371413
NCBI-ProteinID:
XP_070967910
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Position
17:74527809..74536719
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AA seq
505 aa
AA seq
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MSTDSWAQAVDEQEAAAESIGSLQIKDKPEENGTANAALATTATTTTTTTSTNTAAASAT
TPAKTGGGEGDKTGEEDDKDDKAAQSLLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSF
EELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLS
HVDPNNKFPQALCVSPTYELALQTGKVIEQMGKHYSEVKLVYAIRGNKLQRGTQLQEQVV
IGTPGTMLDWCLKFKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKQCQMLLFS
ATFEETVWNFAQRIVPDPNIIKLKREEETLDTIKQYYVLCNSKEEKFMALCNIYGAITIA
QAMIFCHTRKTAGWLAGELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCA
RGIDVEQVSVVINFDLPVDRDGNPDNETYLHRIGRTGRFGKRGLAINMVDSRFSMNVLNK
IQDHFNKKIEKLDTDDLDEIEKIAG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgactcctgggcccaggctgtggacgagcaagaagccgcggcggaatcgatt
ggtagcctacaaatcaaagacaagcccgaggaaaatggtactgccaacgctgcattggcg
acgacagcgacgacgacaacaacaacgacgtcgacaaacacagcagccgccagcgctaca
acgcctgcaaagacaggaggaggagagggagacaaaacaggggaggaggatgataaagat
gacaaggcggcacagtcgttattgaataagttgatacgcagtaatctagtgaacacaacc
aatcaagtagaagttctacagagggatcccaactctccgctttactctgtcaaatccttc
gaggaactacggcttaaacctcagctgctccagggagtgtacgccatgggcttcaaccga
ccctccaaaatccaagagaacgcattacccatgatgctcgctgaacccccacagaacctg
atagcccagtctcagtcagggacagggaagactgctgcctttgtcctggccatgctcagt
catgttgatcccaacaacaagtttccacaggctctctgtgtgtctcctacctatgagctg
gccctgcagacaggaaaggtcattgagcagatggggaagcattactcagaggtcaaacta
gtctacgccatcagaggaaacaaactgcagagaggtacccagctccaggagcaggttgtg
atagggacgccaggcaccatgctggactggtgtctgaagttcaagttcatcgaccccaag
aagatcaaagtgtttgtcctggacgaagctgacgtcatgatcgctacacagggtcatcag
gaccagagtatacgcattcagaggatgctacccaaacagtgccagatgctgctgttctct
gccacctttgaggagacggtgtggaactttgcccagcgcatcgtcccagaccccaacatc
atcaagctgaaacgggaggaggagacgctggacaccatcaagcagtactacgtcctctgt
aacagcaaagaggagaagttcatggccctctgcaacatctacggagccatcaccatcgct
caggccatgatcttctgtcataccaggaaaacggcggggtggttggcaggtgagctgtcc
cgggagggccaccaggtggcgctgctcagtggggagatgcaggtggagcagagagctgct
gtcatcgaccgcttccgagacggaaaggagaaggtcctggtcaccaccaacgtctgtgcc
agaggtattgatgtggagcaggtttccgtggtgataaactttgacctgccagtggacaga
gacggtaacccggacaacgagacgtacctgcatcggattggccgcacgggtcgttttggg
aagcggggattggccatcaacatggtggacagcaggttcagcatgaacgtcctaaacaag
atccaggatcacttcaataagaagatcgagaagctggacactgacgatctggatgagata
gagaaaatcgccggctga
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