Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371449
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Entry
139371449 CDS
T10872
Name
(RefSeq) acid-sensing ion channel 1-like
KO
K04829
acid-sensing ion channel 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139371449
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
139371449
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GFIT
Motif
Pfam:
ASC
DUF6297
Motif
Other DBs
NCBI-GeneID:
139371449
NCBI-ProteinID:
XP_070967972
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Position
17:77537967..77991288
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AA seq
524 aa
AA seq
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MDLKAESEEMVDSFKRPPAIEVFASRSTLHGISHVFTYERICIKRCLWILFFLGSLGFLV
LVCVDRVQFYLQYPHVTKLDEIATPLMIFPAVTFCNLNTFRFGRVTRNDLYHAGELLSLL
NGRYEIRDTHLVEESVLETLKIKSDFLNFKPRPFNMREFYDRTGHDIKDMLLSCYYRGME
CSAEDFTVIFTRYGKCYTFNSGQDNRPLLVTMKGGMGNGLELMLDIQQDEYLPVWGETDE
TSFEAGIKVQIHTQDEPPFIDQLGFGVAPGFQTFVSCQEQRLTYLPPPWGDCKSTPMDSD
FFNAYSLTACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVERDNDY
CVCETPCNMTRFGKEMSFVKIPSKASAKYLAKKYNKTEQYIADNILVLDIFFEALNYETI
EQTKAYEFAGLLGDIGGQMGLFIGASILTILELFDYLYEVIKYKLCRCSNKKHKHNNNNN
RGAVLSLDDVKRHAPCENLHTPGTYPANMLPHHPAQGNVEDFTC
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaaagcggagtcggaagagatggtggactctttcaagcgacctccggcgatt
gaagttttcgccagcaggtcgactctccatggcatctcgcacgtgttcacttatgaacgg
atctgcatcaagcggtgcctgtggatcttgttcttcctgggttctctcgggttcctggtc
ctggtgtgtgtggaccgggtccagttctacttacagtatccccatgtcactaaattggat
gagatagcaacaccgttgatgatcttcccagcagtcaccttctgcaacctcaacacgttt
cgcttcggccgggtgacacgtaacgacctgtaccatgccggggagctcctctcgttgctc
aatggaaggtatgagattagagacactcacctggttgaggaaagcgttctggagaccctg
aagatcaaatctgacttcctcaacttcaagccccgcccctttaacatgcgtgagttctac
gaccggacgggccacgacatcaaggacatgctgctgtcatgctactaccgcggcatggag
tgcagcgctgaggacttcactgtgatcttcacccgttatgggaaatgctacacgttcaac
tctggccaagataaccgcccgctgctggtgaccatgaagggagggatgggtaacggactg
gagctgatgttggatatacaacaggatgaatacctgccagtctggggagaaacagatgag
acgtcgttcgaggcgggcatcaaggttcagatccacacacaggacgagcctcccttcatt
gaccaactgggtttcggtgtggccccgggcttccagaccttcgtatcctgtcaggaacaa
cggctgacatacctgcctcctccgtggggcgactgcaagtccactcccatggactctgac
ttcttcaacgcctacagcctcacggcctgccgtatcgactgtgagacgcgctacctggtg
gagaactgtaattgccgcatggtgcacatgcctggagatgccccttactgtaccccagag
cagtacaaggagtgtgccgaccctgccttggacttcctggtggagagggataatgactac
tgtgtgtgtgagacgccctgcaacatgacacgctttggaaaggagatgtccttcgtcaag
attcccagtaaggcctcagccaagtacctggccaagaagtacaacaagactgagcaatac
attgctgataacatcctggttctggatatcttctttgaggctctgaactacgagaccatc
gagcagacgaaagcttacgagttcgcagggttgctgggtgatatcggtggtcagatgggt
ctcttcataggagccagtatcctcaccatcctggagctctttgactacctatatgaggtg
atcaagtacaagctgtgtcgatgctcaaataagaaacacaaacacaacaacaacaataac
cggggagcagtgctgagtctggacgacgtcaaacggcatgcgccctgtgagaacctgcat
acaccgggtacgtatcctgccaacatgctacctcaccatccagcgcagggcaacgtcgaa
gacttcacgtgctga
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