Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371456
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Entry
139371456 CDS
T10872
Name
(RefSeq) semaphorin-3D-like
KO
K06840
semaphorin 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Ig_6
ig
I-set
Ig_2
Ig_3
Motif
Other DBs
NCBI-GeneID:
139371456
NCBI-ProteinID:
XP_070967981
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Position
17:78899387..79022030
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AA seq
777 aa
AA seq
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MKMRILGPERFCVLLGVSLQLLLLLPDTSSTAATWSQSGPRLQLSHTELHWRNSSSVFWD
RGVSGGYQALLLDEDRGWLLVGGRDHVYLLHSNSLDLPTRTIYWPAATEHVEHCRLAGKN
LSTDCANYVRLLQPFNKTHVYVCGTGAYHPQCTYIDLGRSIEEPSFRLLSHAVESGRGKC
PFSPREPFTARLTDGDLYAGTSVDFMGTNTAIFRTSVHSSKQHYIRTEAYQDHWLNEPEF
VGSFSIPDTHSVDDDKVYIFFKETAVESSQWDKRVYNRVARVCKNDVGGKRSLINRWSTF
LKARLVCSVPGPAGLDTQFDELEDVFMLETKDSQNPIIYGVFSTSSSVFRGSAVCVYSMA
SIRAAFNGPFAHKEGPDYRWVEYKGRIPYPRPGTCPSVTYDPLHKSTRDFPDDVVSFMRG
HHLMWEPILPVTRRPVFTLVNVSYTLRKLVVDRVDAADGQYDVLHLGTDDGQVLKVVSIP
KENREPEEIILEQLTVFQNHAPILSMELSTKRQQLYVSSDEGVAQLPLQRCELYGKDCAD
CCLARDPYCVWDGNTCNRYFPSNKRRARRQDVKHGDSMSQCHNAEDGSESVELKVIYGVQ
SSSTFLECMPRSQQATVKWTVQPSQTRTSRELLQSEDRMVHMKQGLLVQRLEPGDAGLYS
CTTLEHSFSQVQARYDLQVIPQQSMTASQARASDPGAGGAGLRGSPGGTGSHTQRHTKLL
RNYKDLHMVGMASMSATEYCEQLWYREKKKLRQLKWKQTQVDNGKARVRRHDSTPLQ
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaggatcctggggccagagaggttctgtgttctgctgggtgtgtccctccaa
ctgctgctgctgctaccagacacctcctctaccgctgcaacctggagccagagtggaccc
cgcctgcagctctcacacacagagttgcattggaggaacagttccagtgtgttctgggac
cggggtgtgagtgggggttaccaggccctgctgctggatgaggaccgtggctggctgctg
gtgggaggaagagaccacgtctacctgctgcactctaacagtctggatcttcctacacgc
acgatctactggccagctgcgacagaacacgttgagcactgcaggctggcagggaagaac
ctttcgactgactgtgccaactacgtgcgtctcctccagcccttcaataagactcatgtg
tacgtctgtggcaccggggcctaccacccacaatgcacctacatagacctgggacgcagt
attgaggagccatcgttccgcctgctgagccatgctgtggagtctggacgggggaaatgc
ccctttagtccacgggagcccttcaccgccaggctcaccgatggagatttgtatgctggg
acatccgtggatttcatgggcaccaacacagctatattccgtacctctgtgcacagcagc
aaacaacactatatacgcacagaggcataccaggaccactggctcaatgagccagagttt
gtgggttccttctctataccagacacacacagtgtggacgatgacaaagtctatatcttc
ttcaaggagacagctgtagagtccagccagtgggacaagagggtttacaacagagtggca
cgcgtctgcaagaatgacgtcggagggaagaggagtctgattaaccgttggagtacgttc
ctcaaggcccgtctggtgtgttctgtaccaggaccagctggactggacacacaatttgac
gagctagaggacgtcttcatgctggagaccaaagactcccagaaccccatcatctatgga
gtgttctccacctccagttctgtattcagagggtcagcagtgtgtgtctactccatggcc
tctatcagggcagccttcaacggtccattcgcccacaaggaagggcccgactaccgctgg
gtggagtacaaggggaggatcccatatccacgacctggcacttgtcccagtgtgacctac
gaccccctccacaagtctacccgtgacttccctgatgacgtagtgagtttcatgaggggt
catcatctgatgtgggaacccatcctaccggtcacccgccgcccggtctttaccctggtc
aacgtatcctacaccctgagaaagttagtggtggatagggtggacgctgcggatggacag
tatgatgtactacacctgggcacagatgatggccaggtgctgaaagtggtgtctattcct
aaagagaacagggaacctgaggagatcattctggagcagctgactgtgtttcagaatcac
gcccctatccttagcatggagctgtctaccaaacggcaacagctgtacgtaagcagtgat
gagggagtggcccagttacccctgcagaggtgtgagctgtacggtaaagactgtgctgac
tgctgtctggccagagacccttactgtgtctgggacgggaacacatgcaaccgatacttt
cccagcaacaagaggcgagctcggcgccaggatgtgaaacatggggattcaatgagccag
tgtcacaatgcagaagatggttctgagtcagtggagctgaaagtgatctatggggtgcag
agcagctcaaccttcctagagtgtatgcccagatcccaacaggctacagtcaagtggaca
gttcagccgtcacaaactcgcactagcagagagctgctccagagcgaggatcgtatggtc
cacatgaagcagggtctcctggtgcagcggctggagccaggggacgctggcctctacagc
tgtaccaccctggagcactccttctcccaggtccaggcccgctacgacctccaggttata
ccccagcagagcatgacagcatcccaggccagggcatctgatcctggggccggaggggca
gggctgagggggagccctggaggtactgggagccacacccagagacacaccaagctcctc
aggaactataaggacctgcacatggtgggcatggctagcatgagcgcaaccgagtactgt
gagcagctgtggtacagagagaagaagaagctacgccagttgaagtggaaacagacccag
gtggacaacggcaaggccagggtgcgacggcacgactccaccccactacaatga
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