Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371475
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Entry
139371475 CDS
T10872
Name
(RefSeq) lysine-specific demethylase phf2-like isoform X1
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139371475
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
139371475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
PHD
Cupin_8
PHD_5
PHD_ash2p_like
RH_dom
Motif
Other DBs
NCBI-GeneID:
139371475
NCBI-ProteinID:
XP_070968020
LinkDB
All DBs
Position
17:84710281..84818164
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AA seq
1163 aa
AA seq
DB search
MATVPVYCICRLPYDVTQFMIECDACKDWFHGSCVGVDEDEAPDIDIYHCPNCEKTDGKS
TMKNKKRNKHDTGQSGDIRAVQNGSQVFIKELRSRTFPSSEDIVVKLNGSQLTMDYLEEV
GFNEPILVLKKDGLGMSMPAPTFYINDVENHVGPDVGVDVIDVTKQTDSKMKLKDFVDYY
YSTNRKKVLNIINLEFSDKRMDSIVESPQIVRRLSWVENYWPDDALLGKPKVTKYCLIGV
KDSYTDFHIECGGASVWYHVLKGEKIFFLIKPTSANLSLYERWRSSANHTEMFFADQVDK
CYKCTLKQGQTLFIPSGWINAVLTPVDTLAFSGHFVHNLSVEMQMRAYEVEKRLKVNCLT
PFPNFETACWYVGRHLLERFKGLHKSNKQPAAYLVHGAKIINGAFRAWTKKQALLEHEDE
LPENMKPTQLIKDLAKEIRISENAAKAIKSDLSSKAPVEEPPAAPSEPEDPASPSSVPSP
SPPLREKPARKKASKPPKPPKMPKAPKPPKVPKVKEGGNKKGKKEKEVPPPPPPPPSKPS
SLAALESHAKDILSKMDQPKKGKMGGKVANNILSMSGTCKQNHLEKIEIREQNKKQAEAK
WKYKNSKPDSLLKMETEVHKFERTPLSGNKDKFAFSMTHKKLLGSKLKPQTNSSVFSSLQ
NLKEDKAKPVRDEYEYVSDEGELKIDEFPIRRKKRDLSFLSNIKEAIQPSKKPKLIPSDV
KKTDSSDEESLHIDTEVKPEVKRELKGRNLKVKKKAGSTAGILDLLQASKAVGGIDYSVN
SQPPASPSTQEAIQGMLSMANLSSGATAGATAISSDTPGAWGCDRPGRNHSNTTTAGRKG
GAASGAGGGVSKRPAKRPPKKTKKSSSIDSAEFDDDQDHMDACFKDSDYVYPSLESEEDN
PVFKSRSKKRKGSDTPYSPTARVGPSVLRQARPAREGARVASIETGLAAAAAKLSHQEEQ
QKTKKKKKSTKKKPPAAVREEEEEEPVRKLSRYSSSPEPGVGQDTEPGQTNHEYSSGAGG
SQAGGLQPMAPGVFLTQRRPSTSSLSQNNNTAKGERGAGGGAGGEAAGGGGASAGGGGAA
GASAEGGGAAGGGGGAAASGGGGAAGAGGEGAAGGGGASAAGGAASGGAAAKGEAKRLKK
GMATAKQRLGKILKIQRNGKLLL
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtaccagtatattgcatctgcagattaccgtacgacgttacccagtttatg
atcgaatgtgacgcatgcaaggactggtttcacggaagctgtgttggtgtggatgaagat
gaggctccagacattgacatctaccactgtcccaactgtgagaaaacagacggaaaatcc
accatgaaaaacaagaaaaggaataaacacgacacgggacagagtggagacatccgagct
gttcagaacggcagtcaggtgttcatcaaggagctacgcagtcgcaccttccccagctct
gaggacattgtggtgaagctgaacggcagtcagctgacgatggactacctggaagaggtt
ggttttaacgagccgatcctggttctgaagaaggacggtctggggatgtccatgcccgct
cctaccttctacatcaatgatgtggagaaccatgttggtccagacgtgggtgtggatgtg
atagatgtgaccaagcagactgacagtaagatgaagctcaaggactttgtagattactac
tacagcaccaacaggaagaaagtgttaaacattatcaacctggagttctctgacaaaaga
atggacagtatagtggagagccctcagattgtgcggaggttgtcgtgggtagagaactac
tggccagacgatgctctcctggggaaacctaaagtcactaagtactgtctgatcggtgtt
aaagacagctacactgacttccacatcgagtgtggaggggcctccgtatggtaccacgta
ctcaagggagagaagatcttcttcctgatcaagcccacgtcagctaacctatcgttgtac
gagcgctggaggtcctcagccaatcacacagagatgttcttcgctgaccaggtggacaag
tgttacaagtgtactctgaagcagggacagaccctattcataccatcaggttggatcaac
gcagttctgactccagtggacactctggccttttctggacactttgtccacaacctgagt
gttgagatgcagatgagagcatatgaggtggagaagcgtctgaaggtcaactgtctgact
ccgttccccaactttgagacggcctgctggtacgtgggacgccacctgctggagaggttc
aaaggtttacacaagtccaacaagcaaccagctgcctacctggtccacggagctaagatc
atcaacggagcttttagagcttggaccaagaaacaggctctgttagaacacgaggatgag
cttccagagaacatgaagcccactcagctcatcaaggacctggccaaggagatcaggatc
tcagagaatgcggctaaagccattaagagtgatttgagcagcaaggctccagtggaggaa
ccccctgctgccccatcagagcctgaggaccctgcttccccctccagcgtcccctctccc
tcccctcccctccgggaaaaaccagctaggaagaaggcctccaagccacccaagccgccc
aagatgcccaaggcccccaaacctcccaaggtccccaaagtgaaggagggagggaacaag
aaaggaaagaaagagaaggaggtcccccctccccctcctcctcctccatcgaagccctcc
agcctggcagctctggagtctcacgccaaggacatcctcagcaagatggaccaacccaag
aagggcaagatggggggcaaggtggctaacaacatcctgagtatgtcggggacctgtaag
cagaaccatttggagaagattgagatccgagaacagaacaagaaacaggcggaggccaag
tggaaatataagaacagtaaaccagattccttattgaagatggaaactgaagtgcacaag
tttgagagaacgccactgtcgggcaacaaagacaagtttgccttttcaatgacacacaag
aagttactaggttctaagctgaagccccagactaactccagtgtgttcagctcgttacaa
aacctaaaagaggacaaggccaagccggtgagagacgagtatgagtacgtgtcagacgaa
ggagagctgaagattgatgagttccccatcaggaggaaaaagagagacttatccttcctg
tcaaacatcaaagaagcaatccagccatccaagaagccaaagcttatcccctctgatgtc
aagaagactgactcatcagatgaagagtcgctccacatcgacacagaagtcaagccagag
gtcaagcgggagttgaaaggtcgtaacttgaaggtaaagaagaaggcgggaagcacagca
ggcatcctggacctactacaggccagcaaagcagtgggcggcatcgactacagcgtcaac
agtcagccacctgcatctcccagcacacaggaggccattcaggggatgttgtctatggcc
aacctgtcctccggggctaccgctggggccacagccatctcctccgacacccctggggcc
tggggctgtgaccggcccggcagaaaccactccaacaccaccaccgctggacggaaggga
ggagcagcaagcggagcgggaggaggagtaagtaagcggccagccaaacgaccccccaaa
aagacgaagaagagcagcagcatcgacagtgccgagttcgatgatgatcaggatcacatg
gacgcctgcttcaaggactcagattatgtttacccttctctggagtctgaagaggataac
cctgtcttcaaatccagatccaagaagaggaaaggttcagacactccatacagccccaca
gcacgtgtcggtccctctgtgcttcgtcaggcgaggccggccagagaaggagcaagagtg
gcgtccatagagacaggactggcggctgctgcagccaaactctctcaccaggaggaacag
cagaagaccaagaagaagaagaaaagcaccaaaaagaagccccctgctgccgtgagggag
gaggaagaggaggagccagtgaggaagctgagcaggtacagcagctctccagaaccaggc
gtgggccaggacactgagccggggcagaccaaccacgagtactcctctggggcaggaggg
agtcaggctggagggctccagcccatggcccccggagtcttcctcacacagagacgaccc
tccacatcttcattgtctcagaacaacaacacagccaaaggggagcgaggagcaggagga
ggagcaggaggagaagcagcaggaggaggaggagcatcagcaggaggtggaggagcagca
ggagcatcagcagaaggtggaggagcagcaggaggaggaggaggagcagcagcatcagga
ggaggaggagcagcaggtgcaggaggagaaggagcagcaggaggaggaggagcatcagca
gcaggaggagcagcatcaggaggagcagcagcaaagggtgaagcgaagcggctaaagaaa
ggcatggcgacggctaaacagagactgggaaagatcctcaagatccaacgcaatgggaaa
ctcctcctttaa
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integrated database retrieval system
